Protein–RNA interactions for Protein: Q8N0S2

SYCE1, Synaptonemal complex central element protein 1, humanhuman

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE1Q8N0S2 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SYCE1Q8N0S2 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SYCE1Q8N0S2 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.83■■□□□ 1.09
SYCE1Q8N0S2 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.83■■□□□ 1.09
SYCE1Q8N0S2 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.83■■□□□ 1.09
SYCE1Q8N0S2 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.83■■□□□ 1.08
SYCE1Q8N0S2 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
SYCE1Q8N0S2 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SYCE1Q8N0S2 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SYCE1Q8N0S2 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SYCE1Q8N0S2 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.83■■□□□ 1.08
SYCE1Q8N0S2 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.83■■□□□ 1.08
SYCE1Q8N0S2 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SYCE1Q8N0S2 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.82■■□□□ 1.08
SYCE1Q8N0S2 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.82■■□□□ 1.08
SYCE1Q8N0S2 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
SYCE1Q8N0S2 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SYCE1Q8N0S2 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.82■■□□□ 1.08
SYCE1Q8N0S2 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.82■■□□□ 1.08
SYCE1Q8N0S2 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.82■■□□□ 1.08
SYCE1Q8N0S2 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.82■■□□□ 1.08
SYCE1Q8N0S2 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.82■■□□□ 1.08
SYCE1Q8N0S2 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.82■■□□□ 1.08
SYCE1Q8N0S2 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SYCE1Q8N0S2 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SYCE1Q8N0S2 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SYCE1Q8N0S2 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SYCE1Q8N0S2 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SYCE1Q8N0S2 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.81■■□□□ 1.08
SYCE1Q8N0S2 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.81■■□□□ 1.08
SYCE1Q8N0S2 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
SYCE1Q8N0S2 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
SYCE1Q8N0S2 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SYCE1Q8N0S2 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
SYCE1Q8N0S2 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
SYCE1Q8N0S2 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.81■■□□□ 1.08
SYCE1Q8N0S2 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.81■■□□□ 1.08
SYCE1Q8N0S2 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.81■■□□□ 1.08
SYCE1Q8N0S2 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.81■■□□□ 1.08
SYCE1Q8N0S2 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SYCE1Q8N0S2 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.81■■□□□ 1.08
SYCE1Q8N0S2 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SYCE1Q8N0S2 AL162377.1-201ENST00000618844 1793 ntBASIC21.81■■□□□ 1.08
SYCE1Q8N0S2 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SYCE1Q8N0S2 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.8■■□□□ 1.08
SYCE1Q8N0S2 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SYCE1Q8N0S2 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
SYCE1Q8N0S2 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SYCE1Q8N0S2 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SYCE1Q8N0S2 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
SYCE1Q8N0S2 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.8■■□□□ 1.08
SYCE1Q8N0S2 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.8■■□□□ 1.08
SYCE1Q8N0S2 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SYCE1Q8N0S2 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SYCE1Q8N0S2 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.8■■□□□ 1.08
SYCE1Q8N0S2 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.8■■□□□ 1.08
SYCE1Q8N0S2 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SYCE1Q8N0S2 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SYCE1Q8N0S2 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.8■■□□□ 1.08
SYCE1Q8N0S2 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SYCE1Q8N0S2 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SYCE1Q8N0S2 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.8■■□□□ 1.08
SYCE1Q8N0S2 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
SYCE1Q8N0S2 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SYCE1Q8N0S2 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.79■■□□□ 1.08
SYCE1Q8N0S2 AC061975.6-201ENST00000579045 1553 ntBASIC21.79■■□□□ 1.08
SYCE1Q8N0S2 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
SYCE1Q8N0S2 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SYCE1Q8N0S2 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SYCE1Q8N0S2 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.79■■□□□ 1.08
SYCE1Q8N0S2 EDA-201ENST00000338901 1233 ntBASIC21.79■■□□□ 1.08
SYCE1Q8N0S2 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SYCE1Q8N0S2 PBX2P1-201ENST00000493219 1291 ntBASIC21.79■■□□□ 1.08
SYCE1Q8N0S2 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
SYCE1Q8N0S2 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SYCE1Q8N0S2 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SYCE1Q8N0S2 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.79■■□□□ 1.08
SYCE1Q8N0S2 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.79■■□□□ 1.08
SYCE1Q8N0S2 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.79■■□□□ 1.08
SYCE1Q8N0S2 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SYCE1Q8N0S2 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.79■■□□□ 1.08
SYCE1Q8N0S2 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SYCE1Q8N0S2 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
SYCE1Q8N0S2 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SYCE1Q8N0S2 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SYCE1Q8N0S2 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.78■■□□□ 1.08
SYCE1Q8N0S2 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SYCE1Q8N0S2 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SYCE1Q8N0S2 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SYCE1Q8N0S2 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SYCE1Q8N0S2 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.78■■□□□ 1.08
SYCE1Q8N0S2 AP001330.3-201ENST00000520123 633 ntBASIC21.78■■□□□ 1.08
SYCE1Q8N0S2 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.78■■□□□ 1.08
SYCE1Q8N0S2 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SYCE1Q8N0S2 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SYCE1Q8N0S2 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.78■■□□□ 1.08
SYCE1Q8N0S2 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SYCE1Q8N0S2 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SYCE1Q8N0S2 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SYCE1Q8N0S2 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms