Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL27A1Q8IZC6 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.69■□□□□ 0.74
COL27A1Q8IZC6 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL27A1Q8IZC6 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
COL27A1Q8IZC6 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.69■□□□□ 0.74
COL27A1Q8IZC6 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL27A1Q8IZC6 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL27A1Q8IZC6 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.69■□□□□ 0.74
COL27A1Q8IZC6 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COL27A1Q8IZC6 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL27A1Q8IZC6 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
COL27A1Q8IZC6 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
COL27A1Q8IZC6 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL27A1Q8IZC6 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COL27A1Q8IZC6 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL27A1Q8IZC6 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.68■□□□□ 0.74
COL27A1Q8IZC6 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL27A1Q8IZC6 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COL27A1Q8IZC6 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL27A1Q8IZC6 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL27A1Q8IZC6 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COL27A1Q8IZC6 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL27A1Q8IZC6 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL27A1Q8IZC6 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
COL27A1Q8IZC6 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
COL27A1Q8IZC6 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.68■□□□□ 0.74
COL27A1Q8IZC6 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COL27A1Q8IZC6 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
COL27A1Q8IZC6 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL27A1Q8IZC6 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
COL27A1Q8IZC6 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COL27A1Q8IZC6 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL27A1Q8IZC6 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.67■□□□□ 0.74
COL27A1Q8IZC6 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.67■□□□□ 0.74
COL27A1Q8IZC6 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.67■□□□□ 0.74
COL27A1Q8IZC6 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.67■□□□□ 0.74
COL27A1Q8IZC6 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COL27A1Q8IZC6 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.67■□□□□ 0.74
COL27A1Q8IZC6 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
COL27A1Q8IZC6 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.67■□□□□ 0.74
COL27A1Q8IZC6 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL27A1Q8IZC6 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COL27A1Q8IZC6 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL27A1Q8IZC6 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.67■□□□□ 0.74
COL27A1Q8IZC6 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COL27A1Q8IZC6 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL27A1Q8IZC6 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COL27A1Q8IZC6 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL27A1Q8IZC6 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COL27A1Q8IZC6 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL27A1Q8IZC6 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.67■□□□□ 0.74
COL27A1Q8IZC6 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.67■□□□□ 0.74
COL27A1Q8IZC6 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.67■□□□□ 0.74
COL27A1Q8IZC6 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL27A1Q8IZC6 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL27A1Q8IZC6 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL27A1Q8IZC6 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.66■□□□□ 0.74
COL27A1Q8IZC6 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL27A1Q8IZC6 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.66■□□□□ 0.74
COL27A1Q8IZC6 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.66■□□□□ 0.74
COL27A1Q8IZC6 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.66■□□□□ 0.74
COL27A1Q8IZC6 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
COL27A1Q8IZC6 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL27A1Q8IZC6 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL27A1Q8IZC6 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
COL27A1Q8IZC6 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL27A1Q8IZC6 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
COL27A1Q8IZC6 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL27A1Q8IZC6 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL27A1Q8IZC6 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL27A1Q8IZC6 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL27A1Q8IZC6 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL27A1Q8IZC6 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
COL27A1Q8IZC6 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
COL27A1Q8IZC6 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
COL27A1Q8IZC6 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL27A1Q8IZC6 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL27A1Q8IZC6 RPS2P55-201ENST00000397318 883 ntBASIC19.65■□□□□ 0.74
COL27A1Q8IZC6 AC107956.1-201ENST00000494359 873 ntBASIC19.65■□□□□ 0.74
COL27A1Q8IZC6 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL27A1Q8IZC6 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.65■□□□□ 0.74
COL27A1Q8IZC6 BX088651.1-201ENST00000540551 451 ntBASIC19.65■□□□□ 0.74
COL27A1Q8IZC6 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.65■□□□□ 0.74
COL27A1Q8IZC6 AC233702.5-201ENST00000584107 538 ntBASIC19.65■□□□□ 0.74
COL27A1Q8IZC6 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
COL27A1Q8IZC6 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
COL27A1Q8IZC6 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
COL27A1Q8IZC6 C9orf163-202ENST00000624034 2573 ntBASIC19.64■□□□□ 0.74
COL27A1Q8IZC6 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL27A1Q8IZC6 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL27A1Q8IZC6 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL27A1Q8IZC6 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
COL27A1Q8IZC6 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL27A1Q8IZC6 TSPY7P-201ENST00000431358 1114 ntBASIC19.64■□□□□ 0.73
COL27A1Q8IZC6 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL27A1Q8IZC6 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COL27A1Q8IZC6 LINC01023-201ENST00000606054 436 ntBASIC19.64■□□□□ 0.73
COL27A1Q8IZC6 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.64■□□□□ 0.73
COL27A1Q8IZC6 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL27A1Q8IZC6 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms