Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC116Q8IYX3 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC116Q8IYX3 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC116Q8IYX3 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC116Q8IYX3 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CCDC116Q8IYX3 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC116Q8IYX3 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC116Q8IYX3 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC116Q8IYX3 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CCDC116Q8IYX3 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC116Q8IYX3 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC116Q8IYX3 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC116Q8IYX3 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC116Q8IYX3 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC116Q8IYX3 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC116Q8IYX3 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.46■□□□□ 0.71
CCDC116Q8IYX3 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.46■□□□□ 0.71
CCDC116Q8IYX3 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.46■□□□□ 0.71
CCDC116Q8IYX3 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC116Q8IYX3 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.46■□□□□ 0.71
CCDC116Q8IYX3 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC116Q8IYX3 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC116Q8IYX3 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC116Q8IYX3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC116Q8IYX3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC116Q8IYX3 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC116Q8IYX3 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC116Q8IYX3 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC116Q8IYX3 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC116Q8IYX3 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CCDC116Q8IYX3 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC116Q8IYX3 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC116Q8IYX3 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC116Q8IYX3 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC116Q8IYX3 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC116Q8IYX3 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC116Q8IYX3 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CCDC116Q8IYX3 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC116Q8IYX3 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
CCDC116Q8IYX3 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC116Q8IYX3 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC116Q8IYX3 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC116Q8IYX3 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.45■□□□□ 0.7
CCDC116Q8IYX3 SLC7A5P1-201ENST00000568957 537 ntBASIC19.45■□□□□ 0.7
CCDC116Q8IYX3 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC116Q8IYX3 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC116Q8IYX3 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC116Q8IYX3 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC116Q8IYX3 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC116Q8IYX3 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC116Q8IYX3 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC116Q8IYX3 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC116Q8IYX3 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC116Q8IYX3 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC116Q8IYX3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC116Q8IYX3 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC116Q8IYX3 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.44■□□□□ 0.7
CCDC116Q8IYX3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC116Q8IYX3 AC011484.1-201ENST00000377652 1995 ntBASIC19.44■□□□□ 0.7
CCDC116Q8IYX3 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC116Q8IYX3 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC116Q8IYX3 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
CCDC116Q8IYX3 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC116Q8IYX3 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC116Q8IYX3 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CCDC116Q8IYX3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC116Q8IYX3 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
CCDC116Q8IYX3 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC116Q8IYX3 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC116Q8IYX3 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.44■□□□□ 0.7
CCDC116Q8IYX3 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.44■□□□□ 0.7
CCDC116Q8IYX3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC116Q8IYX3 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC116Q8IYX3 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC116Q8IYX3 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC116Q8IYX3 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC116Q8IYX3 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC116Q8IYX3 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC116Q8IYX3 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CCDC116Q8IYX3 MIR5787-201ENST00000611784 55 ntBASIC19.44■□□□□ 0.7
CCDC116Q8IYX3 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.44■□□□□ 0.7
CCDC116Q8IYX3 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC116Q8IYX3 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC116Q8IYX3 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC116Q8IYX3 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
CCDC116Q8IYX3 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CCDC116Q8IYX3 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC116Q8IYX3 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC116Q8IYX3 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC116Q8IYX3 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CCDC116Q8IYX3 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC116Q8IYX3 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC116Q8IYX3 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC116Q8IYX3 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC116Q8IYX3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC116Q8IYX3 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.43■□□□□ 0.7
CCDC116Q8IYX3 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC116Q8IYX3 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC116Q8IYX3 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.43■□□□□ 0.7
CCDC116Q8IYX3 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms