Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 OR10C1-204ENST00000622521 1039 ntBASIC19.14■□□□□ 0.65
C9orf40Q8IXQ3 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
C9orf40Q8IXQ3 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
C9orf40Q8IXQ3 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
C9orf40Q8IXQ3 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
C9orf40Q8IXQ3 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
C9orf40Q8IXQ3 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
C9orf40Q8IXQ3 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
C9orf40Q8IXQ3 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
C9orf40Q8IXQ3 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
C9orf40Q8IXQ3 GPX1P1-201ENST00000388829 606 ntBASIC19.13■□□□□ 0.65
C9orf40Q8IXQ3 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.13■□□□□ 0.65
C9orf40Q8IXQ3 AC083906.2-201ENST00000511578 360 ntBASIC19.13■□□□□ 0.65
C9orf40Q8IXQ3 AF201337.1-201ENST00000520239 748 ntBASIC19.13■□□□□ 0.65
C9orf40Q8IXQ3 AC105036.2-201ENST00000569468 176 ntBASIC19.13■□□□□ 0.65
C9orf40Q8IXQ3 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
C9orf40Q8IXQ3 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.13■□□□□ 0.65
C9orf40Q8IXQ3 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
C9orf40Q8IXQ3 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
C9orf40Q8IXQ3 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
C9orf40Q8IXQ3 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
C9orf40Q8IXQ3 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
C9orf40Q8IXQ3 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
C9orf40Q8IXQ3 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.12■□□□□ 0.65
C9orf40Q8IXQ3 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
C9orf40Q8IXQ3 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
C9orf40Q8IXQ3 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
C9orf40Q8IXQ3 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
C9orf40Q8IXQ3 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.12■□□□□ 0.65
C9orf40Q8IXQ3 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
C9orf40Q8IXQ3 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
C9orf40Q8IXQ3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
C9orf40Q8IXQ3 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
C9orf40Q8IXQ3 ID1-201ENST00000376105 1233 ntBASIC19.12■□□□□ 0.65
C9orf40Q8IXQ3 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
C9orf40Q8IXQ3 HLA-L-209ENST00000420110 1011 ntBASIC19.12■□□□□ 0.65
C9orf40Q8IXQ3 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
C9orf40Q8IXQ3 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
C9orf40Q8IXQ3 GUSBP6-202ENST00000438529 1198 ntBASIC19.12■□□□□ 0.65
C9orf40Q8IXQ3 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.12■□□□□ 0.65
C9orf40Q8IXQ3 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.12■□□□□ 0.65
C9orf40Q8IXQ3 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
C9orf40Q8IXQ3 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
C9orf40Q8IXQ3 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.12■□□□□ 0.65
C9orf40Q8IXQ3 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
C9orf40Q8IXQ3 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
C9orf40Q8IXQ3 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
C9orf40Q8IXQ3 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
C9orf40Q8IXQ3 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
C9orf40Q8IXQ3 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
C9orf40Q8IXQ3 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
C9orf40Q8IXQ3 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
C9orf40Q8IXQ3 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.11■□□□□ 0.65
C9orf40Q8IXQ3 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.11■□□□□ 0.65
C9orf40Q8IXQ3 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
C9orf40Q8IXQ3 AC104771.1-201ENST00000603335 964 ntBASIC19.11■□□□□ 0.65
C9orf40Q8IXQ3 AC011484.1-201ENST00000377652 1995 ntBASIC19.11■□□□□ 0.65
C9orf40Q8IXQ3 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
C9orf40Q8IXQ3 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
C9orf40Q8IXQ3 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.11■□□□□ 0.65
C9orf40Q8IXQ3 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
C9orf40Q8IXQ3 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
C9orf40Q8IXQ3 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
C9orf40Q8IXQ3 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
C9orf40Q8IXQ3 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
C9orf40Q8IXQ3 AL512625.2-201ENST00000417533 625 ntBASIC19.1■□□□□ 0.65
C9orf40Q8IXQ3 TSPY6P-201ENST00000448518 926 ntBASIC19.1■□□□□ 0.65
C9orf40Q8IXQ3 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.1■□□□□ 0.65
C9orf40Q8IXQ3 AL109923.1-201ENST00000618799 583 ntBASIC19.1■□□□□ 0.65
C9orf40Q8IXQ3 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
C9orf40Q8IXQ3 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
C9orf40Q8IXQ3 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
C9orf40Q8IXQ3 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
C9orf40Q8IXQ3 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
C9orf40Q8IXQ3 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
C9orf40Q8IXQ3 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.09■□□□□ 0.65
C9orf40Q8IXQ3 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
C9orf40Q8IXQ3 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
C9orf40Q8IXQ3 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
C9orf40Q8IXQ3 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
C9orf40Q8IXQ3 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
C9orf40Q8IXQ3 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
C9orf40Q8IXQ3 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
C9orf40Q8IXQ3 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
C9orf40Q8IXQ3 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.09■□□□□ 0.65
C9orf40Q8IXQ3 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
C9orf40Q8IXQ3 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.09■□□□□ 0.65
C9orf40Q8IXQ3 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
C9orf40Q8IXQ3 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.08■□□□□ 0.65
C9orf40Q8IXQ3 AC121338.2-201ENST00000622535 1744 ntBASIC19.08■□□□□ 0.65
C9orf40Q8IXQ3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.08■□□□□ 0.65
C9orf40Q8IXQ3 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
C9orf40Q8IXQ3 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
C9orf40Q8IXQ3 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
C9orf40Q8IXQ3 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.08■□□□□ 0.65
C9orf40Q8IXQ3 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
C9orf40Q8IXQ3 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
C9orf40Q8IXQ3 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
C9orf40Q8IXQ3 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.08■□□□□ 0.64
C9orf40Q8IXQ3 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms