Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AIRN-201ENST00000601203 4374 ntBASIC13.59□□□□□ -0.23
SCXQ7RTU7 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
SCXQ7RTU7 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
SCXQ7RTU7 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SCXQ7RTU7 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SCXQ7RTU7 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SCXQ7RTU7 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
SCXQ7RTU7 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
SCXQ7RTU7 AC055733.4-201ENST00000638462 1354 ntBASIC13.58□□□□□ -0.23
SCXQ7RTU7 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.23
SCXQ7RTU7 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.23
SCXQ7RTU7 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
SCXQ7RTU7 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SCXQ7RTU7 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SCXQ7RTU7 OR7E47P-201ENST00000546390 1422 ntBASIC13.58□□□□□ -0.24
SCXQ7RTU7 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
SCXQ7RTU7 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SCXQ7RTU7 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
SCXQ7RTU7 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SCXQ7RTU7 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SCXQ7RTU7 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SCXQ7RTU7 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC13.58□□□□□ -0.24
SCXQ7RTU7 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC13.58□□□□□ -0.24
SCXQ7RTU7 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC13.58□□□□□ -0.24
SCXQ7RTU7 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC13.58□□□□□ -0.24
SCXQ7RTU7 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SCXQ7RTU7 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC13.58□□□□□ -0.24
SCXQ7RTU7 AP001160.3-201ENST00000601484 763 ntBASIC13.58□□□□□ -0.24
SCXQ7RTU7 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC13.58□□□□□ -0.24
SCXQ7RTU7 WT1-AS_3.1-201ENST00000613262 234 ntBASIC13.58□□□□□ -0.24
SCXQ7RTU7 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC13.58□□□□□ -0.24
SCXQ7RTU7 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SCXQ7RTU7 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC13.58□□□□□ -0.24
SCXQ7RTU7 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SCXQ7RTU7 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SCXQ7RTU7 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
SCXQ7RTU7 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
SCXQ7RTU7 AC242852.2-201ENST00000615738 1807 ntBASIC13.57□□□□□ -0.24
SCXQ7RTU7 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SCXQ7RTU7 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
SCXQ7RTU7 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SCXQ7RTU7 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
SCXQ7RTU7 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SCXQ7RTU7 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
SCXQ7RTU7 FXN-202ENST00000396364 980 ntTSL 5 BASIC13.57□□□□□ -0.24
SCXQ7RTU7 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
SCXQ7RTU7 NCF1B-203ENST00000435988 1254 ntBASIC13.57□□□□□ -0.24
SCXQ7RTU7 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SCXQ7RTU7 SERP1-208ENST00000491660 830 ntTSL 2 BASIC13.57□□□□□ -0.24
SCXQ7RTU7 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC13.57□□□□□ -0.24
SCXQ7RTU7 EMC9-206ENST00000560403 872 ntTSL 2 BASIC13.57□□□□□ -0.24
SCXQ7RTU7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC13.57□□□□□ -0.24
SCXQ7RTU7 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC13.57□□□□□ -0.24
SCXQ7RTU7 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC13.57□□□□□ -0.24
SCXQ7RTU7 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC13.57□□□□□ -0.24
SCXQ7RTU7 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SCXQ7RTU7 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SCXQ7RTU7 FBXW4P1-201ENST00000426721 2239 ntBASIC13.57□□□□□ -0.24
SCXQ7RTU7 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SCXQ7RTU7 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SCXQ7RTU7 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC13.57□□□□□ -0.24
SCXQ7RTU7 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SCXQ7RTU7 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC13.57□□□□□ -0.24
SCXQ7RTU7 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
SCXQ7RTU7 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SCXQ7RTU7 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
SCXQ7RTU7 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
SCXQ7RTU7 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SCXQ7RTU7 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SCXQ7RTU7 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC13.56□□□□□ -0.24
SCXQ7RTU7 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
SCXQ7RTU7 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SCXQ7RTU7 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SCXQ7RTU7 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
SCXQ7RTU7 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC13.56□□□□□ -0.24
SCXQ7RTU7 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SCXQ7RTU7 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SCXQ7RTU7 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SCXQ7RTU7 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC13.56□□□□□ -0.24
SCXQ7RTU7 AL034346.1-201ENST00000568244 1277 ntBASIC13.56□□□□□ -0.24
SCXQ7RTU7 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC13.56□□□□□ -0.24
SCXQ7RTU7 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
SCXQ7RTU7 MAZ-216ENST00000616501 991 ntTSL 5 BASIC13.56□□□□□ -0.24
SCXQ7RTU7 MYCNOS-205ENST00000641950 531 ntBASIC13.56□□□□□ -0.24
SCXQ7RTU7 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SCXQ7RTU7 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
SCXQ7RTU7 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SCXQ7RTU7 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC13.56□□□□□ -0.24
SCXQ7RTU7 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SCXQ7RTU7 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SCXQ7RTU7 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
SCXQ7RTU7 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SCXQ7RTU7 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
SCXQ7RTU7 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SCXQ7RTU7 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SCXQ7RTU7 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SCXQ7RTU7 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SCXQ7RTU7 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC13.55□□□□□ -0.24
SCXQ7RTU7 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC13.55□□□□□ -0.24
SCXQ7RTU7 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms