Protein–RNA interactions for Protein: Q6W3E5

GDPD4, Glycerophosphodiester phosphodiesterase domain-containing protein 4, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD4Q6W3E5 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
GDPD4Q6W3E5 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GDPD4Q6W3E5 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
GDPD4Q6W3E5 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GDPD4Q6W3E5 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
GDPD4Q6W3E5 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GDPD4Q6W3E5 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
GDPD4Q6W3E5 BX276092.2-201ENST00000417668 665 ntBASIC20.8■□□□□ 0.92
GDPD4Q6W3E5 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.8■□□□□ 0.92
GDPD4Q6W3E5 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.8■□□□□ 0.92
GDPD4Q6W3E5 AC100791.3-201ENST00000617619 330 ntBASIC20.8■□□□□ 0.92
GDPD4Q6W3E5 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
GDPD4Q6W3E5 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
GDPD4Q6W3E5 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
GDPD4Q6W3E5 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
GDPD4Q6W3E5 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
GDPD4Q6W3E5 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.8■□□□□ 0.92
GDPD4Q6W3E5 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.79■□□□□ 0.92
GDPD4Q6W3E5 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
GDPD4Q6W3E5 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.79■□□□□ 0.92
GDPD4Q6W3E5 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.79■□□□□ 0.92
GDPD4Q6W3E5 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
GDPD4Q6W3E5 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
GDPD4Q6W3E5 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
GDPD4Q6W3E5 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GDPD4Q6W3E5 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
GDPD4Q6W3E5 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GDPD4Q6W3E5 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
GDPD4Q6W3E5 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.79■□□□□ 0.92
GDPD4Q6W3E5 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.79■□□□□ 0.92
GDPD4Q6W3E5 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.79■□□□□ 0.92
GDPD4Q6W3E5 MIR4758-201ENST00000577688 71 ntBASIC20.79■□□□□ 0.92
GDPD4Q6W3E5 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.79■□□□□ 0.92
GDPD4Q6W3E5 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
GDPD4Q6W3E5 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
GDPD4Q6W3E5 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
GDPD4Q6W3E5 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GDPD4Q6W3E5 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GDPD4Q6W3E5 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GDPD4Q6W3E5 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
GDPD4Q6W3E5 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
GDPD4Q6W3E5 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.78■□□□□ 0.92
GDPD4Q6W3E5 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
GDPD4Q6W3E5 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
GDPD4Q6W3E5 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
GDPD4Q6W3E5 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.78■□□□□ 0.92
GDPD4Q6W3E5 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
GDPD4Q6W3E5 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
GDPD4Q6W3E5 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.78■□□□□ 0.92
GDPD4Q6W3E5 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.78■□□□□ 0.92
GDPD4Q6W3E5 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GDPD4Q6W3E5 AL049796.1-201ENST00000565336 1766 ntBASIC20.77■□□□□ 0.92
GDPD4Q6W3E5 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
GDPD4Q6W3E5 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
GDPD4Q6W3E5 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GDPD4Q6W3E5 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
GDPD4Q6W3E5 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GDPD4Q6W3E5 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GDPD4Q6W3E5 AL355472.2-201ENST00000422958 438 ntBASIC20.77■□□□□ 0.92
GDPD4Q6W3E5 AC069152.1-201ENST00000438030 544 ntBASIC20.77■□□□□ 0.92
GDPD4Q6W3E5 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.77■□□□□ 0.92
GDPD4Q6W3E5 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
GDPD4Q6W3E5 AC133041.1-202ENST00000642053 222 ntBASIC20.77■□□□□ 0.92
GDPD4Q6W3E5 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
GDPD4Q6W3E5 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
GDPD4Q6W3E5 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
GDPD4Q6W3E5 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
GDPD4Q6W3E5 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
GDPD4Q6W3E5 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
GDPD4Q6W3E5 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
GDPD4Q6W3E5 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
GDPD4Q6W3E5 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
GDPD4Q6W3E5 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GDPD4Q6W3E5 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.76■□□□□ 0.91
GDPD4Q6W3E5 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GDPD4Q6W3E5 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.76■□□□□ 0.91
GDPD4Q6W3E5 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
GDPD4Q6W3E5 FEM1AP4-201ENST00000443167 1987 ntBASIC20.76■□□□□ 0.91
GDPD4Q6W3E5 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
GDPD4Q6W3E5 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
GDPD4Q6W3E5 MCRIP2P1-201ENST00000394346 511 ntBASIC20.76■□□□□ 0.91
GDPD4Q6W3E5 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.76■□□□□ 0.91
GDPD4Q6W3E5 AC073210.2-201ENST00000430369 194 ntBASIC20.76■□□□□ 0.91
GDPD4Q6W3E5 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.76■□□□□ 0.91
GDPD4Q6W3E5 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.76■□□□□ 0.91
GDPD4Q6W3E5 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.76■□□□□ 0.91
GDPD4Q6W3E5 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.76■□□□□ 0.91
GDPD4Q6W3E5 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
GDPD4Q6W3E5 AC092118.2-201ENST00000613495 667 ntBASIC20.76■□□□□ 0.91
GDPD4Q6W3E5 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.76■□□□□ 0.91
GDPD4Q6W3E5 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
GDPD4Q6W3E5 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GDPD4Q6W3E5 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
GDPD4Q6W3E5 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
GDPD4Q6W3E5 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.75■□□□□ 0.91
GDPD4Q6W3E5 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
GDPD4Q6W3E5 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GDPD4Q6W3E5 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
GDPD4Q6W3E5 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GDPD4Q6W3E5 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms