Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
NHLRC1Q6VVB1 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
NHLRC1Q6VVB1 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NHLRC1Q6VVB1 KRT19P1-201ENST00000405746 1186 ntBASIC18.55■□□□□ 0.56
NHLRC1Q6VVB1 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NHLRC1Q6VVB1 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NHLRC1Q6VVB1 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.55■□□□□ 0.56
NHLRC1Q6VVB1 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NHLRC1Q6VVB1 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NHLRC1Q6VVB1 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NHLRC1Q6VVB1 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NHLRC1Q6VVB1 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NHLRC1Q6VVB1 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.55■□□□□ 0.56
NHLRC1Q6VVB1 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NHLRC1Q6VVB1 AL157384.1-201ENST00000445995 2473 ntBASIC18.55■□□□□ 0.56
NHLRC1Q6VVB1 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NHLRC1Q6VVB1 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NHLRC1Q6VVB1 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NHLRC1Q6VVB1 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
NHLRC1Q6VVB1 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
NHLRC1Q6VVB1 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
NHLRC1Q6VVB1 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
NHLRC1Q6VVB1 PLK5-205ENST00000642079 1969 ntBASIC18.54■□□□□ 0.56
NHLRC1Q6VVB1 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
NHLRC1Q6VVB1 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
NHLRC1Q6VVB1 KRT18P5-201ENST00000436075 1291 ntBASIC18.54■□□□□ 0.56
NHLRC1Q6VVB1 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.54■□□□□ 0.56
NHLRC1Q6VVB1 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
NHLRC1Q6VVB1 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NHLRC1Q6VVB1 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NHLRC1Q6VVB1 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NHLRC1Q6VVB1 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.53■□□□□ 0.56
NHLRC1Q6VVB1 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.53■□□□□ 0.56
NHLRC1Q6VVB1 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
NHLRC1Q6VVB1 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
NHLRC1Q6VVB1 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NHLRC1Q6VVB1 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.53■□□□□ 0.56
NHLRC1Q6VVB1 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
NHLRC1Q6VVB1 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NHLRC1Q6VVB1 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
NHLRC1Q6VVB1 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.53■□□□□ 0.56
NHLRC1Q6VVB1 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.53■□□□□ 0.56
NHLRC1Q6VVB1 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.53■□□□□ 0.56
NHLRC1Q6VVB1 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.53■□□□□ 0.56
NHLRC1Q6VVB1 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.53■□□□□ 0.56
NHLRC1Q6VVB1 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
NHLRC1Q6VVB1 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
NHLRC1Q6VVB1 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NHLRC1Q6VVB1 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NHLRC1Q6VVB1 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NHLRC1Q6VVB1 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
NHLRC1Q6VVB1 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NHLRC1Q6VVB1 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NHLRC1Q6VVB1 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
NHLRC1Q6VVB1 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NHLRC1Q6VVB1 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NHLRC1Q6VVB1 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NHLRC1Q6VVB1 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.52■□□□□ 0.56
NHLRC1Q6VVB1 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.52■□□□□ 0.56
NHLRC1Q6VVB1 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
NHLRC1Q6VVB1 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NHLRC1Q6VVB1 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.52■□□□□ 0.56
NHLRC1Q6VVB1 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
NHLRC1Q6VVB1 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.52■□□□□ 0.56
NHLRC1Q6VVB1 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.52■□□□□ 0.56
NHLRC1Q6VVB1 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.52■□□□□ 0.56
NHLRC1Q6VVB1 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.52■□□□□ 0.56
NHLRC1Q6VVB1 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.52■□□□□ 0.56
NHLRC1Q6VVB1 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.52■□□□□ 0.56
NHLRC1Q6VVB1 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.52■□□□□ 0.56
NHLRC1Q6VVB1 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
NHLRC1Q6VVB1 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
NHLRC1Q6VVB1 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
NHLRC1Q6VVB1 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.52■□□□□ 0.55
NHLRC1Q6VVB1 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NHLRC1Q6VVB1 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NHLRC1Q6VVB1 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.52■□□□□ 0.55
NHLRC1Q6VVB1 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NHLRC1Q6VVB1 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
NHLRC1Q6VVB1 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
NHLRC1Q6VVB1 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NHLRC1Q6VVB1 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NHLRC1Q6VVB1 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.51■□□□□ 0.55
NHLRC1Q6VVB1 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NHLRC1Q6VVB1 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NHLRC1Q6VVB1 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
NHLRC1Q6VVB1 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.51■□□□□ 0.55
NHLRC1Q6VVB1 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NHLRC1Q6VVB1 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NHLRC1Q6VVB1 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NHLRC1Q6VVB1 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NHLRC1Q6VVB1 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NHLRC1Q6VVB1 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NHLRC1Q6VVB1 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
NHLRC1Q6VVB1 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NHLRC1Q6VVB1 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NHLRC1Q6VVB1 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
NHLRC1Q6VVB1 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
NHLRC1Q6VVB1 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
NHLRC1Q6VVB1 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms