Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFWD3Q6PCD5 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.55■■□□□ 1.04
RFWD3Q6PCD5 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
RFWD3Q6PCD5 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RFWD3Q6PCD5 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFWD3Q6PCD5 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFWD3Q6PCD5 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFWD3Q6PCD5 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFWD3Q6PCD5 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.55■■□□□ 1.04
RFWD3Q6PCD5 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RFWD3Q6PCD5 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFWD3Q6PCD5 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
RFWD3Q6PCD5 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RFWD3Q6PCD5 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RFWD3Q6PCD5 GPX1P1-201ENST00000388829 606 ntBASIC21.54■■□□□ 1.04
RFWD3Q6PCD5 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
RFWD3Q6PCD5 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
RFWD3Q6PCD5 AC007322.4-201ENST00000509611 723 ntBASIC21.54■■□□□ 1.04
RFWD3Q6PCD5 AC083906.2-201ENST00000511578 360 ntBASIC21.54■■□□□ 1.04
RFWD3Q6PCD5 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.54■■□□□ 1.04
RFWD3Q6PCD5 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
RFWD3Q6PCD5 AL109923.1-201ENST00000618799 583 ntBASIC21.54■■□□□ 1.04
RFWD3Q6PCD5 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.54■■□□□ 1.04
RFWD3Q6PCD5 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFWD3Q6PCD5 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFWD3Q6PCD5 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.54■■□□□ 1.04
RFWD3Q6PCD5 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
RFWD3Q6PCD5 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
RFWD3Q6PCD5 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.54■■□□□ 1.04
RFWD3Q6PCD5 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFWD3Q6PCD5 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFWD3Q6PCD5 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFWD3Q6PCD5 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFWD3Q6PCD5 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.53■■□□□ 1.04
RFWD3Q6PCD5 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
RFWD3Q6PCD5 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFWD3Q6PCD5 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFWD3Q6PCD5 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFWD3Q6PCD5 CYP2T1P-201ENST00000432607 1285 ntBASIC21.53■■□□□ 1.04
RFWD3Q6PCD5 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.53■■□□□ 1.04
RFWD3Q6PCD5 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFWD3Q6PCD5 AL121832.2-201ENST00000610979 668 ntBASIC21.53■■□□□ 1.04
RFWD3Q6PCD5 AC243732.1-201ENST00000612648 864 ntBASIC21.53■■□□□ 1.04
RFWD3Q6PCD5 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
RFWD3Q6PCD5 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFWD3Q6PCD5 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.53■■□□□ 1.04
RFWD3Q6PCD5 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFWD3Q6PCD5 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFWD3Q6PCD5 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFWD3Q6PCD5 AC005229.4-201ENST00000610085 2198 ntBASIC21.53■■□□□ 1.04
RFWD3Q6PCD5 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RFWD3Q6PCD5 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFWD3Q6PCD5 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFWD3Q6PCD5 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RFWD3Q6PCD5 AC244015.2-201ENST00000616358 1861 ntBASIC21.52■■□□□ 1.04
RFWD3Q6PCD5 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.52■■□□□ 1.04
RFWD3Q6PCD5 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFWD3Q6PCD5 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFWD3Q6PCD5 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RFWD3Q6PCD5 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.52■■□□□ 1.04
RFWD3Q6PCD5 AC245052.3-201ENST00000450182 901 ntBASIC21.52■■□□□ 1.04
RFWD3Q6PCD5 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFWD3Q6PCD5 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
RFWD3Q6PCD5 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
RFWD3Q6PCD5 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFWD3Q6PCD5 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFWD3Q6PCD5 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFWD3Q6PCD5 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.52■■□□□ 1.04
RFWD3Q6PCD5 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFWD3Q6PCD5 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
RFWD3Q6PCD5 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.52■■□□□ 1.03
RFWD3Q6PCD5 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
RFWD3Q6PCD5 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RFWD3Q6PCD5 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.51■■□□□ 1.03
RFWD3Q6PCD5 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RFWD3Q6PCD5 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RFWD3Q6PCD5 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RFWD3Q6PCD5 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.51■■□□□ 1.03
RFWD3Q6PCD5 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.51■■□□□ 1.03
RFWD3Q6PCD5 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RFWD3Q6PCD5 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
RFWD3Q6PCD5 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.51■■□□□ 1.03
RFWD3Q6PCD5 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
RFWD3Q6PCD5 AC092667.1-201ENST00000434301 2586 ntBASIC21.5■■□□□ 1.03
RFWD3Q6PCD5 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFWD3Q6PCD5 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.5■■□□□ 1.03
RFWD3Q6PCD5 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFWD3Q6PCD5 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
RFWD3Q6PCD5 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFWD3Q6PCD5 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFWD3Q6PCD5 AC105036.2-201ENST00000569468 176 ntBASIC21.5■■□□□ 1.03
RFWD3Q6PCD5 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.5■■□□□ 1.03
RFWD3Q6PCD5 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RFWD3Q6PCD5 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFWD3Q6PCD5 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RFWD3Q6PCD5 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.49■■□□□ 1.03
RFWD3Q6PCD5 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.49■■□□□ 1.03
RFWD3Q6PCD5 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
RFWD3Q6PCD5 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.49■■□□□ 1.03
RFWD3Q6PCD5 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms