Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
REEP3Q6NUK4 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
REEP3Q6NUK4 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
REEP3Q6NUK4 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
REEP3Q6NUK4 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
REEP3Q6NUK4 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
REEP3Q6NUK4 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
REEP3Q6NUK4 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
REEP3Q6NUK4 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.26■□□□□ 0.67
REEP3Q6NUK4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
REEP3Q6NUK4 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
REEP3Q6NUK4 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.26■□□□□ 0.67
REEP3Q6NUK4 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
REEP3Q6NUK4 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.26■□□□□ 0.67
REEP3Q6NUK4 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
REEP3Q6NUK4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
REEP3Q6NUK4 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
REEP3Q6NUK4 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
REEP3Q6NUK4 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
REEP3Q6NUK4 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
REEP3Q6NUK4 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.25■□□□□ 0.67
REEP3Q6NUK4 KRT87P-202ENST00000534226 1464 ntBASIC19.25■□□□□ 0.67
REEP3Q6NUK4 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.25■□□□□ 0.67
REEP3Q6NUK4 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
REEP3Q6NUK4 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
REEP3Q6NUK4 AC079140.4-201ENST00000507448 529 ntBASIC19.25■□□□□ 0.67
REEP3Q6NUK4 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.25■□□□□ 0.67
REEP3Q6NUK4 AL139246.5-201ENST00000606645 996 ntBASIC19.25■□□□□ 0.67
REEP3Q6NUK4 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
REEP3Q6NUK4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
REEP3Q6NUK4 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
REEP3Q6NUK4 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
REEP3Q6NUK4 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.24■□□□□ 0.67
REEP3Q6NUK4 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
REEP3Q6NUK4 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
REEP3Q6NUK4 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
REEP3Q6NUK4 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
REEP3Q6NUK4 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
REEP3Q6NUK4 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
REEP3Q6NUK4 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.24■□□□□ 0.67
REEP3Q6NUK4 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.24■□□□□ 0.67
REEP3Q6NUK4 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.24■□□□□ 0.67
REEP3Q6NUK4 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.24■□□□□ 0.67
REEP3Q6NUK4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
REEP3Q6NUK4 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.24■□□□□ 0.67
REEP3Q6NUK4 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.24■□□□□ 0.67
REEP3Q6NUK4 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
REEP3Q6NUK4 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.24■□□□□ 0.67
REEP3Q6NUK4 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
REEP3Q6NUK4 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
REEP3Q6NUK4 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
REEP3Q6NUK4 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
REEP3Q6NUK4 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
REEP3Q6NUK4 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
REEP3Q6NUK4 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
REEP3Q6NUK4 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
REEP3Q6NUK4 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
REEP3Q6NUK4 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
REEP3Q6NUK4 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
REEP3Q6NUK4 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
REEP3Q6NUK4 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
REEP3Q6NUK4 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
REEP3Q6NUK4 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.23■□□□□ 0.67
REEP3Q6NUK4 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
REEP3Q6NUK4 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
REEP3Q6NUK4 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
REEP3Q6NUK4 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
REEP3Q6NUK4 AC142381.2-201ENST00000566120 298 ntBASIC19.23■□□□□ 0.67
REEP3Q6NUK4 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
REEP3Q6NUK4 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
REEP3Q6NUK4 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
REEP3Q6NUK4 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
REEP3Q6NUK4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
REEP3Q6NUK4 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
REEP3Q6NUK4 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.22■□□□□ 0.67
REEP3Q6NUK4 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.22■□□□□ 0.67
REEP3Q6NUK4 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
REEP3Q6NUK4 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
REEP3Q6NUK4 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.22■□□□□ 0.67
REEP3Q6NUK4 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
REEP3Q6NUK4 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
REEP3Q6NUK4 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
REEP3Q6NUK4 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
REEP3Q6NUK4 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.22■□□□□ 0.67
REEP3Q6NUK4 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.22■□□□□ 0.67
REEP3Q6NUK4 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.22■□□□□ 0.67
REEP3Q6NUK4 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
REEP3Q6NUK4 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
REEP3Q6NUK4 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
REEP3Q6NUK4 MIR6084-201ENST00000622012 110 ntBASIC19.22■□□□□ 0.67
REEP3Q6NUK4 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
REEP3Q6NUK4 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
REEP3Q6NUK4 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
REEP3Q6NUK4 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.22■□□□□ 0.67
REEP3Q6NUK4 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
REEP3Q6NUK4 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
REEP3Q6NUK4 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
REEP3Q6NUK4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.22■□□□□ 0.67
REEP3Q6NUK4 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
REEP3Q6NUK4 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms