Protein–RNA interactions for Protein: Q6NSI3

FAM53A, Protein FAM53A, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53AQ6NSI3 YBX1P1-201ENST00000445822 960 ntBASIC17.12■□□□□ 0.33
FAM53AQ6NSI3 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.12■□□□□ 0.33
FAM53AQ6NSI3 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FAM53AQ6NSI3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
FAM53AQ6NSI3 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FAM53AQ6NSI3 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.12■□□□□ 0.33
FAM53AQ6NSI3 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.12■□□□□ 0.33
FAM53AQ6NSI3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FAM53AQ6NSI3 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FAM53AQ6NSI3 AC004854.2-201ENST00000608450 1441 ntBASIC17.12■□□□□ 0.33
FAM53AQ6NSI3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
FAM53AQ6NSI3 AP004607.4-201ENST00000530158 1459 ntBASIC17.12■□□□□ 0.33
FAM53AQ6NSI3 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.12■□□□□ 0.33
FAM53AQ6NSI3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.11■□□□□ 0.33
FAM53AQ6NSI3 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FAM53AQ6NSI3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FAM53AQ6NSI3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
FAM53AQ6NSI3 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FAM53AQ6NSI3 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.11■□□□□ 0.33
FAM53AQ6NSI3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
FAM53AQ6NSI3 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FAM53AQ6NSI3 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.11■□□□□ 0.33
FAM53AQ6NSI3 KRT18P14-201ENST00000534205 1250 ntBASIC17.11■□□□□ 0.33
FAM53AQ6NSI3 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FAM53AQ6NSI3 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
FAM53AQ6NSI3 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
FAM53AQ6NSI3 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FAM53AQ6NSI3 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FAM53AQ6NSI3 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
FAM53AQ6NSI3 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FAM53AQ6NSI3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FAM53AQ6NSI3 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
FAM53AQ6NSI3 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.1■□□□□ 0.33
FAM53AQ6NSI3 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM53AQ6NSI3 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
FAM53AQ6NSI3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.1■□□□□ 0.33
FAM53AQ6NSI3 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FAM53AQ6NSI3 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM53AQ6NSI3 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FAM53AQ6NSI3 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.1■□□□□ 0.33
FAM53AQ6NSI3 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FAM53AQ6NSI3 AC123595.1-201ENST00000440769 1046 ntBASIC17.1■□□□□ 0.33
FAM53AQ6NSI3 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FAM53AQ6NSI3 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM53AQ6NSI3 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.1■□□□□ 0.33
FAM53AQ6NSI3 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM53AQ6NSI3 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.1■□□□□ 0.33
FAM53AQ6NSI3 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FAM53AQ6NSI3 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM53AQ6NSI3 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FAM53AQ6NSI3 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FAM53AQ6NSI3 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FAM53AQ6NSI3 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM53AQ6NSI3 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM53AQ6NSI3 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.1■□□□□ 0.33
FAM53AQ6NSI3 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM53AQ6NSI3 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FAM53AQ6NSI3 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FAM53AQ6NSI3 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.09■□□□□ 0.33
FAM53AQ6NSI3 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.09■□□□□ 0.33
FAM53AQ6NSI3 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
FAM53AQ6NSI3 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
FAM53AQ6NSI3 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
FAM53AQ6NSI3 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.09■□□□□ 0.33
FAM53AQ6NSI3 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FAM53AQ6NSI3 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.09■□□□□ 0.33
FAM53AQ6NSI3 AC138907.5-202ENST00000569484 235 ntBASIC17.09■□□□□ 0.33
FAM53AQ6NSI3 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
FAM53AQ6NSI3 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.09■□□□□ 0.33
FAM53AQ6NSI3 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
FAM53AQ6NSI3 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
FAM53AQ6NSI3 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FAM53AQ6NSI3 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
FAM53AQ6NSI3 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
FAM53AQ6NSI3 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
FAM53AQ6NSI3 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
FAM53AQ6NSI3 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FAM53AQ6NSI3 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FAM53AQ6NSI3 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
FAM53AQ6NSI3 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
FAM53AQ6NSI3 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
FAM53AQ6NSI3 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.08■□□□□ 0.33
FAM53AQ6NSI3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
FAM53AQ6NSI3 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
FAM53AQ6NSI3 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.08■□□□□ 0.33
FAM53AQ6NSI3 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
FAM53AQ6NSI3 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
FAM53AQ6NSI3 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
FAM53AQ6NSI3 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
FAM53AQ6NSI3 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FAM53AQ6NSI3 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FAM53AQ6NSI3 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
FAM53AQ6NSI3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
FAM53AQ6NSI3 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
FAM53AQ6NSI3 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FAM53AQ6NSI3 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
FAM53AQ6NSI3 MIR935-201ENST00000401179 91 ntBASIC17.08■□□□□ 0.32
FAM53AQ6NSI3 AC010141.2-201ENST00000452426 721 ntBASIC17.08■□□□□ 0.32
FAM53AQ6NSI3 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.08■□□□□ 0.32
FAM53AQ6NSI3 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms