Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
HIST2H2AA3Q6FI13 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HIST2H2AA3Q6FI13 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HIST2H2AA3Q6FI13 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HIST2H2AA3Q6FI13 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HIST2H2AA3Q6FI13 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HIST2H2AA3Q6FI13 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HIST2H2AA3Q6FI13 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.94■□□□□ 0.78
HIST2H2AA3Q6FI13 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.94■□□□□ 0.78
HIST2H2AA3Q6FI13 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.94■□□□□ 0.78
HIST2H2AA3Q6FI13 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
HIST2H2AA3Q6FI13 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.94■□□□□ 0.78
HIST2H2AA3Q6FI13 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
HIST2H2AA3Q6FI13 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.94■□□□□ 0.78
HIST2H2AA3Q6FI13 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
HIST2H2AA3Q6FI13 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HIST2H2AA3Q6FI13 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.94■□□□□ 0.78
HIST2H2AA3Q6FI13 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.94■□□□□ 0.78
HIST2H2AA3Q6FI13 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
HIST2H2AA3Q6FI13 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
HIST2H2AA3Q6FI13 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HIST2H2AA3Q6FI13 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.94■□□□□ 0.78
HIST2H2AA3Q6FI13 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HIST2H2AA3Q6FI13 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
HIST2H2AA3Q6FI13 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HIST2H2AA3Q6FI13 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.94■□□□□ 0.78
HIST2H2AA3Q6FI13 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
HIST2H2AA3Q6FI13 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HIST2H2AA3Q6FI13 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HIST2H2AA3Q6FI13 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
HIST2H2AA3Q6FI13 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HIST2H2AA3Q6FI13 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HIST2H2AA3Q6FI13 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HIST2H2AA3Q6FI13 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.93■□□□□ 0.78
HIST2H2AA3Q6FI13 RARRES2P6-201ENST00000567333 442 ntBASIC19.93■□□□□ 0.78
HIST2H2AA3Q6FI13 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.93■□□□□ 0.78
HIST2H2AA3Q6FI13 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HIST2H2AA3Q6FI13 RARRES2P11-201ENST00000635158 484 ntBASIC19.93■□□□□ 0.78
HIST2H2AA3Q6FI13 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HIST2H2AA3Q6FI13 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HIST2H2AA3Q6FI13 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
HIST2H2AA3Q6FI13 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HIST2H2AA3Q6FI13 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HIST2H2AA3Q6FI13 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HIST2H2AA3Q6FI13 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HIST2H2AA3Q6FI13 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HIST2H2AA3Q6FI13 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
HIST2H2AA3Q6FI13 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HIST2H2AA3Q6FI13 PLK5-205ENST00000642079 1969 ntBASIC19.92■□□□□ 0.78
HIST2H2AA3Q6FI13 AIRN-201ENST00000601203 4374 ntBASIC19.92■□□□□ 0.78
HIST2H2AA3Q6FI13 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
HIST2H2AA3Q6FI13 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HIST2H2AA3Q6FI13 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.92■□□□□ 0.78
HIST2H2AA3Q6FI13 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
HIST2H2AA3Q6FI13 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HIST2H2AA3Q6FI13 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HIST2H2AA3Q6FI13 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HIST2H2AA3Q6FI13 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HIST2H2AA3Q6FI13 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HIST2H2AA3Q6FI13 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HIST2H2AA3Q6FI13 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
HIST2H2AA3Q6FI13 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
HIST2H2AA3Q6FI13 AC011484.1-201ENST00000377652 1995 ntBASIC19.92■□□□□ 0.78
HIST2H2AA3Q6FI13 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
HIST2H2AA3Q6FI13 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
HIST2H2AA3Q6FI13 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HIST2H2AA3Q6FI13 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.91■□□□□ 0.78
HIST2H2AA3Q6FI13 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.91■□□□□ 0.78
HIST2H2AA3Q6FI13 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HIST2H2AA3Q6FI13 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
HIST2H2AA3Q6FI13 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HIST2H2AA3Q6FI13 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.91■□□□□ 0.78
HIST2H2AA3Q6FI13 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
HIST2H2AA3Q6FI13 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HIST2H2AA3Q6FI13 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
HIST2H2AA3Q6FI13 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.91■□□□□ 0.78
HIST2H2AA3Q6FI13 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.91■□□□□ 0.78
HIST2H2AA3Q6FI13 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HIST2H2AA3Q6FI13 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.91■□□□□ 0.78
HIST2H2AA3Q6FI13 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HIST2H2AA3Q6FI13 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
HIST2H2AA3Q6FI13 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HIST2H2AA3Q6FI13 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
HIST2H2AA3Q6FI13 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.91■□□□□ 0.78
HIST2H2AA3Q6FI13 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.91■□□□□ 0.78
HIST2H2AA3Q6FI13 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
HIST2H2AA3Q6FI13 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.91■□□□□ 0.78
HIST2H2AA3Q6FI13 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.9■□□□□ 0.78
HIST2H2AA3Q6FI13 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.9■□□□□ 0.78
HIST2H2AA3Q6FI13 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
HIST2H2AA3Q6FI13 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HIST2H2AA3Q6FI13 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.9■□□□□ 0.78
HIST2H2AA3Q6FI13 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
HIST2H2AA3Q6FI13 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.9■□□□□ 0.78
HIST2H2AA3Q6FI13 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.9■□□□□ 0.78
HIST2H2AA3Q6FI13 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.9■□□□□ 0.78
HIST2H2AA3Q6FI13 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.9■□□□□ 0.78
HIST2H2AA3Q6FI13 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HIST2H2AA3Q6FI13 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.9■□□□□ 0.78
HIST2H2AA3Q6FI13 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms