Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
LYSMD4Q5XG99 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LYSMD4Q5XG99 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.42■□□□□ 0.86
LYSMD4Q5XG99 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
LYSMD4Q5XG99 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
LYSMD4Q5XG99 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
LYSMD4Q5XG99 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LYSMD4Q5XG99 AC116050.2-201ENST00000612102 1779 ntBASIC20.41■□□□□ 0.86
LYSMD4Q5XG99 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LYSMD4Q5XG99 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LYSMD4Q5XG99 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LYSMD4Q5XG99 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LYSMD4Q5XG99 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.41■□□□□ 0.86
LYSMD4Q5XG99 AC239809.2-201ENST00000415381 517 ntBASIC20.41■□□□□ 0.86
LYSMD4Q5XG99 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.41■□□□□ 0.86
LYSMD4Q5XG99 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.41■□□□□ 0.86
LYSMD4Q5XG99 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.41■□□□□ 0.86
LYSMD4Q5XG99 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.41■□□□□ 0.86
LYSMD4Q5XG99 MTDHP1-201ENST00000605323 784 ntBASIC20.41■□□□□ 0.86
LYSMD4Q5XG99 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.41■□□□□ 0.86
LYSMD4Q5XG99 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LYSMD4Q5XG99 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LYSMD4Q5XG99 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LYSMD4Q5XG99 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LYSMD4Q5XG99 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LYSMD4Q5XG99 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LYSMD4Q5XG99 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LYSMD4Q5XG99 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
LYSMD4Q5XG99 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LYSMD4Q5XG99 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
LYSMD4Q5XG99 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
LYSMD4Q5XG99 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
LYSMD4Q5XG99 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
LYSMD4Q5XG99 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
LYSMD4Q5XG99 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.4■□□□□ 0.86
LYSMD4Q5XG99 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.4■□□□□ 0.86
LYSMD4Q5XG99 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LYSMD4Q5XG99 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LYSMD4Q5XG99 TSPY7P-201ENST00000431358 1114 ntBASIC20.4■□□□□ 0.86
LYSMD4Q5XG99 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.4■□□□□ 0.86
LYSMD4Q5XG99 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.4■□□□□ 0.86
LYSMD4Q5XG99 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.4■□□□□ 0.86
LYSMD4Q5XG99 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
LYSMD4Q5XG99 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.4■□□□□ 0.86
LYSMD4Q5XG99 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LYSMD4Q5XG99 AP001412.1-201ENST00000608405 714 ntBASIC20.4■□□□□ 0.86
LYSMD4Q5XG99 AL023875.1-201ENST00000640777 796 ntBASIC20.4■□□□□ 0.86
LYSMD4Q5XG99 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
LYSMD4Q5XG99 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.39■□□□□ 0.86
LYSMD4Q5XG99 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
LYSMD4Q5XG99 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
LYSMD4Q5XG99 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
LYSMD4Q5XG99 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LYSMD4Q5XG99 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.39■□□□□ 0.85
LYSMD4Q5XG99 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LYSMD4Q5XG99 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.39■□□□□ 0.85
LYSMD4Q5XG99 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LYSMD4Q5XG99 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LYSMD4Q5XG99 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.39■□□□□ 0.85
LYSMD4Q5XG99 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LYSMD4Q5XG99 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.39■□□□□ 0.85
LYSMD4Q5XG99 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.39■□□□□ 0.85
LYSMD4Q5XG99 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
LYSMD4Q5XG99 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.39■□□□□ 0.85
LYSMD4Q5XG99 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.39■□□□□ 0.85
LYSMD4Q5XG99 AC124016.1-201ENST00000609552 612 ntBASIC20.39■□□□□ 0.85
LYSMD4Q5XG99 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LYSMD4Q5XG99 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LYSMD4Q5XG99 AC080038.3-201ENST00000623346 1952 ntBASIC20.39■□□□□ 0.85
LYSMD4Q5XG99 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LYSMD4Q5XG99 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
LYSMD4Q5XG99 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LYSMD4Q5XG99 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LYSMD4Q5XG99 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
LYSMD4Q5XG99 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.38■□□□□ 0.85
LYSMD4Q5XG99 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LYSMD4Q5XG99 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LYSMD4Q5XG99 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LYSMD4Q5XG99 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.38■□□□□ 0.85
LYSMD4Q5XG99 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.38■□□□□ 0.85
LYSMD4Q5XG99 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
LYSMD4Q5XG99 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
LYSMD4Q5XG99 AC133681.1-201ENST00000465482 601 ntBASIC20.38■□□□□ 0.85
LYSMD4Q5XG99 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LYSMD4Q5XG99 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LYSMD4Q5XG99 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.38■□□□□ 0.85
LYSMD4Q5XG99 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
LYSMD4Q5XG99 AC010331.1-201ENST00000611423 582 ntBASIC20.38■□□□□ 0.85
LYSMD4Q5XG99 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LYSMD4Q5XG99 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
LYSMD4Q5XG99 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
LYSMD4Q5XG99 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LYSMD4Q5XG99 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
LYSMD4Q5XG99 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.38■□□□□ 0.85
LYSMD4Q5XG99 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LYSMD4Q5XG99 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
LYSMD4Q5XG99 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
LYSMD4Q5XG99 AL135905.2-201ENST00000584934 1404 ntBASIC20.37■□□□□ 0.85
LYSMD4Q5XG99 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LYSMD4Q5XG99 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms