Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.53■□□□□ 0.72
RUNDC3AQ59EK9 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.53■□□□□ 0.72
RUNDC3AQ59EK9 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RUNDC3AQ59EK9 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
RUNDC3AQ59EK9 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.52■□□□□ 0.72
RUNDC3AQ59EK9 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
RUNDC3AQ59EK9 AFG3L1P-217ENST00000557444 2447 ntBASIC19.52■□□□□ 0.72
RUNDC3AQ59EK9 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
RUNDC3AQ59EK9 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.52■□□□□ 0.72
RUNDC3AQ59EK9 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.52■□□□□ 0.72
RUNDC3AQ59EK9 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.52■□□□□ 0.72
RUNDC3AQ59EK9 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.52■□□□□ 0.72
RUNDC3AQ59EK9 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.52■□□□□ 0.72
RUNDC3AQ59EK9 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.52■□□□□ 0.72
RUNDC3AQ59EK9 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.52■□□□□ 0.72
RUNDC3AQ59EK9 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RUNDC3AQ59EK9 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.52■□□□□ 0.71
RUNDC3AQ59EK9 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.52■□□□□ 0.71
RUNDC3AQ59EK9 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
RUNDC3AQ59EK9 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RUNDC3AQ59EK9 PCDHAC2-203ENST00000615316 3011 ntBASIC19.51■□□□□ 0.71
RUNDC3AQ59EK9 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RUNDC3AQ59EK9 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RUNDC3AQ59EK9 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RUNDC3AQ59EK9 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RUNDC3AQ59EK9 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.51■□□□□ 0.71
RUNDC3AQ59EK9 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.51■□□□□ 0.71
RUNDC3AQ59EK9 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.51■□□□□ 0.71
RUNDC3AQ59EK9 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.51■□□□□ 0.71
RUNDC3AQ59EK9 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.51■□□□□ 0.71
RUNDC3AQ59EK9 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
RUNDC3AQ59EK9 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RUNDC3AQ59EK9 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RUNDC3AQ59EK9 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RUNDC3AQ59EK9 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
RUNDC3AQ59EK9 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RUNDC3AQ59EK9 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.51■□□□□ 0.71
RUNDC3AQ59EK9 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RUNDC3AQ59EK9 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RUNDC3AQ59EK9 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RUNDC3AQ59EK9 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
RUNDC3AQ59EK9 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RUNDC3AQ59EK9 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.51■□□□□ 0.71
RUNDC3AQ59EK9 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RUNDC3AQ59EK9 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RUNDC3AQ59EK9 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.5■□□□□ 0.71
RUNDC3AQ59EK9 AC061975.6-201ENST00000579045 1553 ntBASIC19.5■□□□□ 0.71
RUNDC3AQ59EK9 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RUNDC3AQ59EK9 AP004607.4-201ENST00000530158 1459 ntBASIC19.5■□□□□ 0.71
RUNDC3AQ59EK9 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RUNDC3AQ59EK9 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
RUNDC3AQ59EK9 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RUNDC3AQ59EK9 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.5■□□□□ 0.71
RUNDC3AQ59EK9 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
RUNDC3AQ59EK9 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
RUNDC3AQ59EK9 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
RUNDC3AQ59EK9 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.5■□□□□ 0.71
RUNDC3AQ59EK9 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
RUNDC3AQ59EK9 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.49■□□□□ 0.71
RUNDC3AQ59EK9 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.49■□□□□ 0.71
RUNDC3AQ59EK9 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
RUNDC3AQ59EK9 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.49■□□□□ 0.71
RUNDC3AQ59EK9 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RUNDC3AQ59EK9 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RUNDC3AQ59EK9 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.49■□□□□ 0.71
RUNDC3AQ59EK9 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
RUNDC3AQ59EK9 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RUNDC3AQ59EK9 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RUNDC3AQ59EK9 MIR572-201ENST00000384983 95 ntBASIC19.49■□□□□ 0.71
RUNDC3AQ59EK9 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RUNDC3AQ59EK9 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.49■□□□□ 0.71
RUNDC3AQ59EK9 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.49■□□□□ 0.71
RUNDC3AQ59EK9 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RUNDC3AQ59EK9 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RUNDC3AQ59EK9 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.49■□□□□ 0.71
RUNDC3AQ59EK9 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RUNDC3AQ59EK9 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RUNDC3AQ59EK9 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RUNDC3AQ59EK9 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
RUNDC3AQ59EK9 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RUNDC3AQ59EK9 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
RUNDC3AQ59EK9 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
RUNDC3AQ59EK9 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RUNDC3AQ59EK9 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.48■□□□□ 0.71
RUNDC3AQ59EK9 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
RUNDC3AQ59EK9 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RUNDC3AQ59EK9 AC027682.1-201ENST00000562846 899 ntBASIC19.48■□□□□ 0.71
RUNDC3AQ59EK9 AC099778.1-201ENST00000568593 1911 ntBASIC19.48■□□□□ 0.71
RUNDC3AQ59EK9 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RUNDC3AQ59EK9 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.48■□□□□ 0.71
RUNDC3AQ59EK9 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RUNDC3AQ59EK9 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RUNDC3AQ59EK9 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RUNDC3AQ59EK9 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RUNDC3AQ59EK9 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
RUNDC3AQ59EK9 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RUNDC3AQ59EK9 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
RUNDC3AQ59EK9 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RUNDC3AQ59EK9 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RUNDC3AQ59EK9 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms