Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDH1Q08174 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDH1Q08174 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDH1Q08174 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.92■□□□□ 0.78
PCDH1Q08174 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDH1Q08174 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.92■□□□□ 0.78
PCDH1Q08174 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCDH1Q08174 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.92■□□□□ 0.78
PCDH1Q08174 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.92■□□□□ 0.78
PCDH1Q08174 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.92■□□□□ 0.78
PCDH1Q08174 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.92■□□□□ 0.78
PCDH1Q08174 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDH1Q08174 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.92■□□□□ 0.78
PCDH1Q08174 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.92■□□□□ 0.78
PCDH1Q08174 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.92■□□□□ 0.78
PCDH1Q08174 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.92■□□□□ 0.78
PCDH1Q08174 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.92■□□□□ 0.78
PCDH1Q08174 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH1Q08174 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.91■□□□□ 0.78
PCDH1Q08174 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH1Q08174 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.91■□□□□ 0.78
PCDH1Q08174 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH1Q08174 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
PCDH1Q08174 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
PCDH1Q08174 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
PCDH1Q08174 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.91■□□□□ 0.78
PCDH1Q08174 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
PCDH1Q08174 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH1Q08174 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
PCDH1Q08174 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH1Q08174 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH1Q08174 AC026271.2-201ENST00000428091 497 ntBASIC19.91■□□□□ 0.78
PCDH1Q08174 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.91■□□□□ 0.78
PCDH1Q08174 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.91■□□□□ 0.78
PCDH1Q08174 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH1Q08174 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH1Q08174 AC087623.3-201ENST00000607047 1098 ntBASIC19.91■□□□□ 0.78
PCDH1Q08174 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH1Q08174 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH1Q08174 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
PCDH1Q08174 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH1Q08174 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH1Q08174 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH1Q08174 AC007225.1-201ENST00000566331 1836 ntBASIC19.9■□□□□ 0.78
PCDH1Q08174 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PCDH1Q08174 FEM1AP1-201ENST00000431297 1995 ntBASIC19.9■□□□□ 0.78
PCDH1Q08174 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDH1Q08174 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDH1Q08174 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDH1Q08174 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDH1Q08174 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDH1Q08174 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.9■□□□□ 0.78
PCDH1Q08174 AC091799.1-201ENST00000422823 811 ntBASIC19.9■□□□□ 0.78
PCDH1Q08174 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDH1Q08174 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PCDH1Q08174 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PCDH1Q08174 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.9■□□□□ 0.78
PCDH1Q08174 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDH1Q08174 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDH1Q08174 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.9■□□□□ 0.78
PCDH1Q08174 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDH1Q08174 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.9■□□□□ 0.78
PCDH1Q08174 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDH1Q08174 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDH1Q08174 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDH1Q08174 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDH1Q08174 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PCDH1Q08174 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PCDH1Q08174 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDH1Q08174 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDH1Q08174 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.9■□□□□ 0.78
PCDH1Q08174 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDH1Q08174 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDH1Q08174 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDH1Q08174 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.89■□□□□ 0.77
PCDH1Q08174 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDH1Q08174 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDH1Q08174 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.89■□□□□ 0.77
PCDH1Q08174 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.89■□□□□ 0.77
PCDH1Q08174 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.89■□□□□ 0.77
PCDH1Q08174 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
PCDH1Q08174 AC027702.1-201ENST00000563810 1770 ntBASIC19.89■□□□□ 0.77
PCDH1Q08174 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.89■□□□□ 0.77
PCDH1Q08174 AC116050.2-201ENST00000612102 1779 ntBASIC19.89■□□□□ 0.77
PCDH1Q08174 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDH1Q08174 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.88■□□□□ 0.77
PCDH1Q08174 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDH1Q08174 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDH1Q08174 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
PCDH1Q08174 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDH1Q08174 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.88■□□□□ 0.77
PCDH1Q08174 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDH1Q08174 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PCDH1Q08174 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDH1Q08174 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDH1Q08174 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDH1Q08174 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDH1Q08174 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDH1Q08174 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDH1Q08174 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms