Protein–RNA interactions for Protein: Q06623

HDA3, HDA1 complex subunit 3, yeastyeast

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HDA3Q06623 YDL007C-AYDL007C-A 258 nt4.52□□□□□ -1.69
HDA3Q06623 YEL018C-AYEL018C-A 534 nt4.52□□□□□ -1.69
HDA3Q06623 RIP1YEL024W 648 nt4.52□□□□□ -1.69
HDA3Q06623 YGL149WYGL149W 306 nt4.52□□□□□ -1.69
HDA3Q06623 GPP1YIL053W 753 nt4.52□□□□□ -1.69
HDA3Q06623 YIL066W-AYIL066W-A 444 nt4.52□□□□□ -1.69
HDA3Q06623 RPS21BYJL136C 264 nt4.52□□□□□ -1.69
HDA3Q06623 RPL8BYLL045C 771 nt4.52□□□□□ -1.69
HDA3Q06623 RPB11YOL005C 363 nt4.52□□□□□ -1.69
HDA3Q06623 MGR2YPL098C 342 nt4.52□□□□□ -1.69
HDA3Q06623 HOT1YMR172W 2160 nt4.52□□□□□ -1.69
HDA3Q06623 YDR061WYDR061W 1620 nt4.52□□□□□ -1.69
HDA3Q06623 MDR1YGR100W 2853 nt4.51□□□□□ -1.69
HDA3Q06623 SNA2YDR525W-A 240 nt4.51□□□□□ -1.69
HDA3Q06623 RPL29YFR032C-A 180 nt4.51□□□□□ -1.69
HDA3Q06623 HBT1YDL223C 3141 nt4.51□□□□□ -1.69
HDA3Q06623 EGT2YNL327W 3126 nt4.5□□□□□ -1.69
HDA3Q06623 YDL211CYDL211C 1119 nt4.5□□□□□ -1.69
HDA3Q06623 tK(CUU)CtK(CUU)C 73 nt4.5□□□□□ -1.69
HDA3Q06623 tK(CUU)D1tK(CUU)D1 73 nt4.5□□□□□ -1.69
HDA3Q06623 tK(CUU)D2tK(CUU)D2 73 nt4.5□□□□□ -1.69
HDA3Q06623 tK(CUU)E1tK(CUU)E1 73 nt4.5□□□□□ -1.69
HDA3Q06623 tK(CUU)E2tK(CUU)E2 73 nt4.5□□□□□ -1.69
HDA3Q06623 tK(CUU)FtK(CUU)F 73 nt4.5□□□□□ -1.69
HDA3Q06623 tK(CUU)G1tK(CUU)G1 73 nt4.5□□□□□ -1.69
HDA3Q06623 tK(CUU)G2tK(CUU)G2 73 nt4.5□□□□□ -1.69
HDA3Q06623 tK(CUU)G3tK(CUU)G3 73 nt4.5□□□□□ -1.69
HDA3Q06623 tK(CUU)ItK(CUU)I 73 nt4.5□□□□□ -1.69
HDA3Q06623 tK(CUU)JtK(CUU)J 73 nt4.5□□□□□ -1.69
HDA3Q06623 tK(CUU)KtK(CUU)K 73 nt4.5□□□□□ -1.69
HDA3Q06623 tK(CUU)MtK(CUU)M 73 nt4.5□□□□□ -1.69
HDA3Q06623 tK(CUU)PtK(CUU)P 73 nt4.5□□□□□ -1.69
HDA3Q06623 YAL047W-AYAL047W-A 330 nt4.5□□□□□ -1.69
HDA3Q06623 YLR458WYLR458W 381 nt4.5□□□□□ -1.69
HDA3Q06623 MRPL39YML009C 213 nt4.5□□□□□ -1.69
HDA3Q06623 TGL4YKR089C 2733 nt4.49□□□□□ -1.69
HDA3Q06623 ABF1YKL112W 2196 nt4.49□□□□□ -1.69
HDA3Q06623 SEC6YIL068C 2418 nt4.49□□□□□ -1.69
HDA3Q06623 YDR344CYDR344C 444 nt4.49□□□□□ -1.69
HDA3Q06623 YER091C-AYER091C-A 222 nt4.49□□□□□ -1.69
HDA3Q06623 RPL37AYLR185W 267 nt4.49□□□□□ -1.69
HDA3Q06623 YGR266WYGR266W 2106 nt4.49□□□□□ -1.69
HDA3Q06623 HFA1YMR207C 6372 nt4.49□□□□□ -1.69
HDA3Q06623 TOM70YNL121C 1854 nt4.49□□□□□ -1.69
HDA3Q06623 ARG5,6YER069W 2592 nt4.49□□□□□ -1.69
HDA3Q06623 GIP4YAL031C 2283 nt4.48□□□□□ -1.69
HDA3Q06623 PDS5YMR076C 3834 nt4.48□□□□□ -1.69
HDA3Q06623 BCD1YHR040W 1101 nt4.48□□□□□ -1.69
HDA3Q06623 BAT1YHR208W 1182 nt4.48□□□□□ -1.69
HDA3Q06623 PAM16YJL104W 450 nt4.48□□□□□ -1.69
HDA3Q06623 LSM2YBL026W 288 nt4.48□□□□□ -1.69
HDA3Q06623 ABF2YMR072W 552 nt4.48□□□□□ -1.69
HDA3Q06623 TRM44YPL030W 1704 nt4.48□□□□□ -1.69
HDA3Q06623 NHX1YDR456W 1902 nt4.48□□□□□ -1.69
HDA3Q06623 NAT1YDL040C 2565 nt4.48□□□□□ -1.69
HDA3Q06623 SRB4YER022W 2064 nt4.47□□□□□ -1.69
HDA3Q06623 IMH1YLR309C 2736 nt4.47□□□□□ -1.69
HDA3Q06623 NUP2YLR335W 2163 nt4.47□□□□□ -1.69
HDA3Q06623 ARF1YDL192W 546 nt4.47□□□□□ -1.69
HDA3Q06623 TIF35YDR429C 825 nt4.47□□□□□ -1.69
HDA3Q06623 FMP10YER182W 735 nt4.47□□□□□ -1.69
HDA3Q06623 GTT2YLL060C 702 nt4.47□□□□□ -1.69
HDA3Q06623 YNL205CYNL205C 423 nt4.47□□□□□ -1.69
HDA3Q06623 CTT1YGR088W 1689 nt4.47□□□□□ -1.69
HDA3Q06623 APC1YNL172W 5247 nt4.47□□□□□ -1.69
HDA3Q06623 ARP7YPR034W 1434 nt4.46□□□□□ -1.69
HDA3Q06623 SNX41YDR425W 1878 nt4.46□□□□□ -1.7
HDA3Q06623 PAU13YHL046C 363 nt4.46□□□□□ -1.7
HDA3Q06623 URM1YIL008W 300 nt4.46□□□□□ -1.7
HDA3Q06623 PAU14YIL176C 363 nt4.46□□□□□ -1.7
HDA3Q06623 COA3YJL062W-A 258 nt4.46□□□□□ -1.7
HDA3Q06623 PAU1YJL223C 363 nt4.46□□□□□ -1.7
HDA3Q06623 YKL111CYKL111C 336 nt4.46□□□□□ -1.7
HDA3Q06623 YNL170WYNL170W 396 nt4.46□□□□□ -1.7
HDA3Q06623 snR49snR49 165 nt4.46□□□□□ -1.7
HDA3Q06623 KAP114YGL241W 3015 nt4.46□□□□□ -1.7
HDA3Q06623 SMI1YGR229C 1518 nt4.46□□□□□ -1.7
HDA3Q06623 MDM32YOR147W 1869 nt4.45□□□□□ -1.7
HDA3Q06623 RKM1YPL208W 1752 nt4.45□□□□□ -1.7
HDA3Q06623 PFK1YGR240C 2964 nt4.45□□□□□ -1.7
HDA3Q06623 SSH1YBR283C 1473 nt4.45□□□□□ -1.7
HDA3Q06623 YER188C-AYER188C-A 300 nt4.45□□□□□ -1.7
HDA3Q06623 RPC10YHR143W-A 213 nt4.45□□□□□ -1.7
HDA3Q06623 SDH2YLL041C 801 nt4.45□□□□□ -1.7
HDA3Q06623 FBP1YLR377C 1047 nt4.45□□□□□ -1.7
HDA3Q06623 DAD3YBR233W-A 285 nt4.45□□□□□ -1.7
HDA3Q06623 SNF12YNR023W 1701 nt4.44□□□□□ -1.7
HDA3Q06623 RPS0AYGR214W 759 nt4.44□□□□□ -1.7
HDA3Q06623 YJR023CYJR023C 402 nt4.44□□□□□ -1.7
HDA3Q06623 RAD27YKL113C 1149 nt4.44□□□□□ -1.7
HDA3Q06623 SUI1YNL244C 327 nt4.44□□□□□ -1.7
HDA3Q06623 snR42snR42 351 nt4.44□□□□□ -1.7
HDA3Q06623 ALG8YOR067C 1734 nt4.43□□□□□ -1.7
HDA3Q06623 BYE1YKL005C 1785 nt4.43□□□□□ -1.7
HDA3Q06623 IRC4YDR540C 540 nt4.43□□□□□ -1.7
HDA3Q06623 RAD6YGL058W 519 nt4.43□□□□□ -1.7
HDA3Q06623 RPA34YJL148W 702 nt4.43□□□□□ -1.7
HDA3Q06623 YJR140W-AYJR140W-A 150 nt4.43□□□□□ -1.7
HDA3Q06623 PSY1YKL076C 384 nt4.43□□□□□ -1.7
HDA3Q06623 TAR1YLR154W-C 375 nt4.43□□□□□ -1.7
Retrieved 100 of 7,029 protein–RNA pairs in 82.1 ms