Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
HIST1H3AP68431 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.07■□□□□ 0.48
HIST1H3AP68431 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.07■□□□□ 0.48
HIST1H3AP68431 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
HIST1H3AP68431 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.07■□□□□ 0.48
HIST1H3AP68431 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.07■□□□□ 0.48
HIST1H3AP68431 NTF6G-201ENST00000591094 616 ntBASIC18.07■□□□□ 0.48
HIST1H3AP68431 AC087623.3-201ENST00000607047 1098 ntBASIC18.07■□□□□ 0.48
HIST1H3AP68431 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.07■□□□□ 0.48
HIST1H3AP68431 FEM1AP1-201ENST00000431297 1995 ntBASIC18.07■□□□□ 0.48
HIST1H3AP68431 AC007225.1-201ENST00000566331 1836 ntBASIC18.07■□□□□ 0.48
HIST1H3AP68431 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
HIST1H3AP68431 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HIST1H3AP68431 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HIST1H3AP68431 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.07■□□□□ 0.48
HIST1H3AP68431 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
HIST1H3AP68431 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.06■□□□□ 0.48
HIST1H3AP68431 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
HIST1H3AP68431 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
HIST1H3AP68431 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HIST1H3AP68431 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HIST1H3AP68431 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HIST1H3AP68431 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.06■□□□□ 0.48
HIST1H3AP68431 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HIST1H3AP68431 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HIST1H3AP68431 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.06■□□□□ 0.48
HIST1H3AP68431 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HIST1H3AP68431 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.06■□□□□ 0.48
HIST1H3AP68431 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.06■□□□□ 0.48
HIST1H3AP68431 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
HIST1H3AP68431 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.06■□□□□ 0.48
HIST1H3AP68431 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HIST1H3AP68431 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HIST1H3AP68431 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.06■□□□□ 0.48
HIST1H3AP68431 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
HIST1H3AP68431 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HIST1H3AP68431 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
HIST1H3AP68431 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HIST1H3AP68431 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.05■□□□□ 0.48
HIST1H3AP68431 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
HIST1H3AP68431 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HIST1H3AP68431 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
HIST1H3AP68431 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HIST1H3AP68431 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
HIST1H3AP68431 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HIST1H3AP68431 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.05■□□□□ 0.48
HIST1H3AP68431 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
HIST1H3AP68431 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.05■□□□□ 0.48
HIST1H3AP68431 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HIST1H3AP68431 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
HIST1H3AP68431 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HIST1H3AP68431 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
HIST1H3AP68431 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.05■□□□□ 0.48
HIST1H3AP68431 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.05■□□□□ 0.48
HIST1H3AP68431 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
HIST1H3AP68431 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HIST1H3AP68431 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HIST1H3AP68431 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.04■□□□□ 0.48
HIST1H3AP68431 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HIST1H3AP68431 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HIST1H3AP68431 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HIST1H3AP68431 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.04■□□□□ 0.48
HIST1H3AP68431 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HIST1H3AP68431 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HIST1H3AP68431 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HIST1H3AP68431 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HIST1H3AP68431 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.04■□□□□ 0.48
HIST1H3AP68431 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HIST1H3AP68431 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HIST1H3AP68431 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HIST1H3AP68431 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.04■□□□□ 0.48
HIST1H3AP68431 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.04■□□□□ 0.48
HIST1H3AP68431 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HIST1H3AP68431 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.04■□□□□ 0.48
HIST1H3AP68431 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.04■□□□□ 0.48
HIST1H3AP68431 AC091799.1-201ENST00000422823 811 ntBASIC18.04■□□□□ 0.48
HIST1H3AP68431 AC026271.2-201ENST00000428091 497 ntBASIC18.04■□□□□ 0.48
HIST1H3AP68431 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.04■□□□□ 0.48
HIST1H3AP68431 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.04■□□□□ 0.48
HIST1H3AP68431 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HIST1H3AP68431 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HIST1H3AP68431 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HIST1H3AP68431 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HIST1H3AP68431 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HIST1H3AP68431 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HIST1H3AP68431 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HIST1H3AP68431 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HIST1H3AP68431 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HIST1H3AP68431 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HIST1H3AP68431 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.04■□□□□ 0.48
HIST1H3AP68431 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HIST1H3AP68431 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HIST1H3AP68431 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HIST1H3AP68431 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HIST1H3AP68431 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HIST1H3AP68431 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.03■□□□□ 0.48
HIST1H3AP68431 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HIST1H3AP68431 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
HIST1H3AP68431 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.03■□□□□ 0.48
HIST1H3AP68431 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms