Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ACTA1P68133 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.41■□□□□ 0.54
ACTA1P68133 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ACTA1P68133 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.41■□□□□ 0.54
ACTA1P68133 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.41■□□□□ 0.54
ACTA1P68133 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.41■□□□□ 0.54
ACTA1P68133 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.41■□□□□ 0.54
ACTA1P68133 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ACTA1P68133 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ACTA1P68133 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.4■□□□□ 0.54
ACTA1P68133 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ACTA1P68133 BX005040.4-201ENST00000637145 1518 ntBASIC18.4■□□□□ 0.54
ACTA1P68133 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
ACTA1P68133 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.4■□□□□ 0.54
ACTA1P68133 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
ACTA1P68133 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ACTA1P68133 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
ACTA1P68133 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ACTA1P68133 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.4■□□□□ 0.54
ACTA1P68133 IGHV3-19-201ENST00000521488 291 ntBASIC18.4■□□□□ 0.54
ACTA1P68133 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.4■□□□□ 0.54
ACTA1P68133 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
ACTA1P68133 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
ACTA1P68133 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
ACTA1P68133 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.4■□□□□ 0.54
ACTA1P68133 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.4■□□□□ 0.54
ACTA1P68133 AL162377.1-201ENST00000618844 1793 ntBASIC18.4■□□□□ 0.54
ACTA1P68133 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ACTA1P68133 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
ACTA1P68133 AC011484.1-201ENST00000377652 1995 ntBASIC18.39■□□□□ 0.53
ACTA1P68133 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ACTA1P68133 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ACTA1P68133 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ACTA1P68133 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.39■□□□□ 0.53
ACTA1P68133 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
ACTA1P68133 AC005224.4-201ENST00000583262 1652 ntBASIC18.39■□□□□ 0.53
ACTA1P68133 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ACTA1P68133 AC233992.3-201ENST00000607491 485 ntBASIC18.39■□□□□ 0.53
ACTA1P68133 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.39■□□□□ 0.53
ACTA1P68133 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
ACTA1P68133 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
ACTA1P68133 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ACTA1P68133 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
ACTA1P68133 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ACTA1P68133 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ACTA1P68133 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ACTA1P68133 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.38■□□□□ 0.53
ACTA1P68133 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.38■□□□□ 0.53
ACTA1P68133 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
ACTA1P68133 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ACTA1P68133 AL391422.3-201ENST00000603791 2761 ntBASIC18.38■□□□□ 0.53
ACTA1P68133 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.38■□□□□ 0.53
ACTA1P68133 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.38■□□□□ 0.53
ACTA1P68133 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
ACTA1P68133 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.38■□□□□ 0.53
ACTA1P68133 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ACTA1P68133 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ACTA1P68133 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ACTA1P68133 AC126544.1-201ENST00000580842 1059 ntBASIC18.38■□□□□ 0.53
ACTA1P68133 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.38■□□□□ 0.53
ACTA1P68133 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ACTA1P68133 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
ACTA1P68133 AC007952.6-201ENST00000573168 2673 ntBASIC18.38■□□□□ 0.53
ACTA1P68133 AC003957.1-201ENST00000625108 2673 ntBASIC18.38■□□□□ 0.53
ACTA1P68133 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ACTA1P68133 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
ACTA1P68133 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ACTA1P68133 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ACTA1P68133 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
ACTA1P68133 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ACTA1P68133 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.37■□□□□ 0.53
ACTA1P68133 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ACTA1P68133 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.37■□□□□ 0.53
ACTA1P68133 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ACTA1P68133 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ACTA1P68133 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ACTA1P68133 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
ACTA1P68133 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ACTA1P68133 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
ACTA1P68133 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
ACTA1P68133 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ACTA1P68133 AC131281.2-201ENST00000520478 145 ntBASIC18.37■□□□□ 0.53
ACTA1P68133 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.37■□□□□ 0.53
ACTA1P68133 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.37■□□□□ 0.53
ACTA1P68133 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.37■□□□□ 0.53
ACTA1P68133 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ACTA1P68133 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
ACTA1P68133 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ACTA1P68133 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ACTA1P68133 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.37■□□□□ 0.53
ACTA1P68133 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.37■□□□□ 0.53
ACTA1P68133 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
ACTA1P68133 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.37■□□□□ 0.53
ACTA1P68133 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
ACTA1P68133 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.37■□□□□ 0.53
ACTA1P68133 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ACTA1P68133 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
ACTA1P68133 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.37■□□□□ 0.53
ACTA1P68133 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
ACTA1P68133 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms