Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBA52P62987 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.73■□□□□ 0.43
UBA52P62987 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBA52P62987 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBA52P62987 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.73■□□□□ 0.43
UBA52P62987 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.73■□□□□ 0.43
UBA52P62987 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
UBA52P62987 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBA52P62987 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.73■□□□□ 0.43
UBA52P62987 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
UBA52P62987 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBA52P62987 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.73■□□□□ 0.43
UBA52P62987 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
UBA52P62987 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.73■□□□□ 0.43
UBA52P62987 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.72■□□□□ 0.43
UBA52P62987 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UBA52P62987 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
UBA52P62987 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UBA52P62987 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.72■□□□□ 0.43
UBA52P62987 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBA52P62987 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBA52P62987 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UBA52P62987 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UBA52P62987 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UBA52P62987 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.72■□□□□ 0.43
UBA52P62987 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBA52P62987 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBA52P62987 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UBA52P62987 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBA52P62987 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
UBA52P62987 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBA52P62987 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
UBA52P62987 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.72■□□□□ 0.43
UBA52P62987 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.72■□□□□ 0.43
UBA52P62987 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.72■□□□□ 0.43
UBA52P62987 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBA52P62987 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
UBA52P62987 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
UBA52P62987 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.72■□□□□ 0.43
UBA52P62987 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBA52P62987 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
UBA52P62987 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBA52P62987 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
UBA52P62987 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBA52P62987 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBA52P62987 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UBA52P62987 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UBA52P62987 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UBA52P62987 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBA52P62987 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
UBA52P62987 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.71■□□□□ 0.43
UBA52P62987 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC17.71■□□□□ 0.43
UBA52P62987 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
UBA52P62987 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC17.71■□□□□ 0.43
UBA52P62987 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBA52P62987 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
UBA52P62987 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
UBA52P62987 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.71■□□□□ 0.43
UBA52P62987 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBA52P62987 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.71■□□□□ 0.43
UBA52P62987 HLA-L-209ENST00000420110 1011 ntBASIC17.71■□□□□ 0.43
UBA52P62987 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.71■□□□□ 0.43
UBA52P62987 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UBA52P62987 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.71■□□□□ 0.43
UBA52P62987 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.71■□□□□ 0.43
UBA52P62987 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.71■□□□□ 0.43
UBA52P62987 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
UBA52P62987 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.71■□□□□ 0.43
UBA52P62987 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBA52P62987 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UBA52P62987 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
UBA52P62987 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
UBA52P62987 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.71■□□□□ 0.42
UBA52P62987 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.71■□□□□ 0.42
UBA52P62987 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBA52P62987 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
UBA52P62987 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBA52P62987 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBA52P62987 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBA52P62987 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
UBA52P62987 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBA52P62987 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.7■□□□□ 0.42
UBA52P62987 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.7■□□□□ 0.42
UBA52P62987 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.7■□□□□ 0.42
UBA52P62987 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
UBA52P62987 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBA52P62987 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBA52P62987 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBA52P62987 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
UBA52P62987 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBA52P62987 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBA52P62987 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
UBA52P62987 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBA52P62987 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBA52P62987 AC144652.1-201ENST00000609974 1624 ntBASIC17.69■□□□□ 0.42
UBA52P62987 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
UBA52P62987 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
UBA52P62987 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
UBA52P62987 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.69■□□□□ 0.42
UBA52P62987 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms