Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
RPS28P62857 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RPS28P62857 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC12.12□□□□□ -0.47
RPS28P62857 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
RPS28P62857 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RPS28P62857 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RPS28P62857 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC12.11□□□□□ -0.47
RPS28P62857 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RPS28P62857 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RPS28P62857 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
RPS28P62857 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RPS28P62857 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC12.11□□□□□ -0.47
RPS28P62857 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC12.11□□□□□ -0.47
RPS28P62857 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
RPS28P62857 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RPS28P62857 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC12.11□□□□□ -0.47
RPS28P62857 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC12.11□□□□□ -0.47
RPS28P62857 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RPS28P62857 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RPS28P62857 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RPS28P62857 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC12.11□□□□□ -0.47
RPS28P62857 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
RPS28P62857 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RPS28P62857 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RPS28P62857 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RPS28P62857 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC12.11□□□□□ -0.47
RPS28P62857 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
RPS28P62857 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RPS28P62857 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
RPS28P62857 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RPS28P62857 AC018695.7-201ENST00000624587 2492 ntBASIC12.11□□□□□ -0.47
RPS28P62857 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC12.11□□□□□ -0.47
RPS28P62857 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RPS28P62857 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RPS28P62857 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RPS28P62857 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
RPS28P62857 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
RPS28P62857 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC12.1□□□□□ -0.47
RPS28P62857 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC12.1□□□□□ -0.47
RPS28P62857 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RPS28P62857 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC12.1□□□□□ -0.47
RPS28P62857 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
RPS28P62857 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RPS28P62857 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC12.1□□□□□ -0.47
RPS28P62857 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC12.1□□□□□ -0.47
RPS28P62857 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
RPS28P62857 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RPS28P62857 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC12.1□□□□□ -0.47
RPS28P62857 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
RPS28P62857 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
RPS28P62857 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
RPS28P62857 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RPS28P62857 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC12.1□□□□□ -0.47
RPS28P62857 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC12.1□□□□□ -0.47
RPS28P62857 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
RPS28P62857 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
RPS28P62857 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
RPS28P62857 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
RPS28P62857 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RPS28P62857 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RPS28P62857 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
RPS28P62857 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RPS28P62857 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RPS28P62857 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC12.1□□□□□ -0.47
RPS28P62857 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC12.1□□□□□ -0.47
RPS28P62857 AC068880.1-201ENST00000507289 2297 ntBASIC12.09□□□□□ -0.47
RPS28P62857 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RPS28P62857 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
RPS28P62857 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RPS28P62857 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC12.09□□□□□ -0.47
RPS28P62857 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
RPS28P62857 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RPS28P62857 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RPS28P62857 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC12.09□□□□□ -0.47
RPS28P62857 LBX2-AS1-202ENST00000603175 2083 ntBASIC12.09□□□□□ -0.47
RPS28P62857 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
RPS28P62857 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
RPS28P62857 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
RPS28P62857 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RPS28P62857 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
RPS28P62857 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RPS28P62857 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
RPS28P62857 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC12.09□□□□□ -0.47
RPS28P62857 AC020763.4-201ENST00000623414 4170 ntBASIC12.09□□□□□ -0.47
RPS28P62857 CICP6-201ENST00000457191 2729 ntBASIC12.09□□□□□ -0.47
RPS28P62857 TUB-203ENST00000534099 1759 ntTSL 2 BASIC12.09□□□□□ -0.47
RPS28P62857 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC12.09□□□□□ -0.47
RPS28P62857 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RPS28P62857 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RPS28P62857 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RPS28P62857 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
RPS28P62857 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RPS28P62857 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RPS28P62857 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
RPS28P62857 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
RPS28P62857 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC12.08□□□□□ -0.47
RPS28P62857 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
RPS28P62857 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
RPS28P62857 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RPS28P62857 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC12.08□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms