Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RPS4XP62701 GABARAPL3-202ENST00000624044 1851 ntBASIC18.68■□□□□ 0.58
RPS4XP62701 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPS4XP62701 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPS4XP62701 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPS4XP62701 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPS4XP62701 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPS4XP62701 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RPS4XP62701 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPS4XP62701 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
RPS4XP62701 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
RPS4XP62701 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPS4XP62701 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
RPS4XP62701 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPS4XP62701 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.67■□□□□ 0.58
RPS4XP62701 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPS4XP62701 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.67■□□□□ 0.58
RPS4XP62701 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
RPS4XP62701 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.67■□□□□ 0.58
RPS4XP62701 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.67■□□□□ 0.58
RPS4XP62701 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RPS4XP62701 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.67■□□□□ 0.58
RPS4XP62701 AC011484.1-201ENST00000377652 1995 ntBASIC18.67■□□□□ 0.58
RPS4XP62701 AC073314.1-201ENST00000568729 2216 ntBASIC18.67■□□□□ 0.58
RPS4XP62701 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RPS4XP62701 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPS4XP62701 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPS4XP62701 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPS4XP62701 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPS4XP62701 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPS4XP62701 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPS4XP62701 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPS4XP62701 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPS4XP62701 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RPS4XP62701 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.66■□□□□ 0.58
RPS4XP62701 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.66■□□□□ 0.58
RPS4XP62701 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.66■□□□□ 0.58
RPS4XP62701 AC080038.1-201ENST00000611274 1154 ntBASIC18.66■□□□□ 0.58
RPS4XP62701 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.66■□□□□ 0.58
RPS4XP62701 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPS4XP62701 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RPS4XP62701 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPS4XP62701 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RPS4XP62701 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.66■□□□□ 0.58
RPS4XP62701 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RPS4XP62701 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPS4XP62701 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RPS4XP62701 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPS4XP62701 KRT16P2-201ENST00000414673 1423 ntBASIC18.66■□□□□ 0.58
RPS4XP62701 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RPS4XP62701 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPS4XP62701 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.65■□□□□ 0.58
RPS4XP62701 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.65■□□□□ 0.58
RPS4XP62701 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPS4XP62701 AC007225.1-201ENST00000566331 1836 ntBASIC18.65■□□□□ 0.58
RPS4XP62701 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPS4XP62701 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPS4XP62701 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RPS4XP62701 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPS4XP62701 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RPS4XP62701 AC010141.2-201ENST00000452426 721 ntBASIC18.65■□□□□ 0.58
RPS4XP62701 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.65■□□□□ 0.58
RPS4XP62701 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.65■□□□□ 0.58
RPS4XP62701 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPS4XP62701 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RPS4XP62701 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.65■□□□□ 0.58
RPS4XP62701 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPS4XP62701 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.64■□□□□ 0.58
RPS4XP62701 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
RPS4XP62701 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.58
RPS4XP62701 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RPS4XP62701 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RPS4XP62701 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.64■□□□□ 0.57
RPS4XP62701 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.64■□□□□ 0.57
RPS4XP62701 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.64■□□□□ 0.57
RPS4XP62701 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.64■□□□□ 0.57
RPS4XP62701 AC006015.1-201ENST00000429970 570 ntBASIC18.64■□□□□ 0.57
RPS4XP62701 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.64■□□□□ 0.57
RPS4XP62701 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RPS4XP62701 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.64■□□□□ 0.57
RPS4XP62701 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.64■□□□□ 0.57
RPS4XP62701 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RPS4XP62701 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
RPS4XP62701 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RPS4XP62701 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.64■□□□□ 0.57
RPS4XP62701 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
RPS4XP62701 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RPS4XP62701 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
RPS4XP62701 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RPS4XP62701 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RPS4XP62701 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
RPS4XP62701 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.63■□□□□ 0.57
RPS4XP62701 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RPS4XP62701 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPS4XP62701 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RPS4XP62701 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPS4XP62701 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.63■□□□□ 0.57
RPS4XP62701 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RPS4XP62701 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.63■□□□□ 0.57
RPS4XP62701 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms