Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN20P56880 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN20P56880 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN20P56880 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.93■□□□□ 0.62
CLDN20P56880 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
CLDN20P56880 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.93■□□□□ 0.62
CLDN20P56880 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN20P56880 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN20P56880 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CLDN20P56880 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN20P56880 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
CLDN20P56880 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CLDN20P56880 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN20P56880 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.92■□□□□ 0.62
CLDN20P56880 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
CLDN20P56880 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.92■□□□□ 0.62
CLDN20P56880 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CLDN20P56880 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.92■□□□□ 0.62
CLDN20P56880 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN20P56880 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.92■□□□□ 0.62
CLDN20P56880 POU5F1P4-201ENST00000413175 1085 ntBASIC18.92■□□□□ 0.62
CLDN20P56880 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.92■□□□□ 0.62
CLDN20P56880 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN20P56880 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.92■□□□□ 0.62
CLDN20P56880 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CLDN20P56880 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN20P56880 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.92■□□□□ 0.62
CLDN20P56880 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CLDN20P56880 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN20P56880 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN20P56880 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN20P56880 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN20P56880 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN20P56880 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.92■□□□□ 0.62
CLDN20P56880 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN20P56880 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN20P56880 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.91■□□□□ 0.62
CLDN20P56880 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.91■□□□□ 0.62
CLDN20P56880 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.91■□□□□ 0.62
CLDN20P56880 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.91■□□□□ 0.62
CLDN20P56880 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN20P56880 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CLDN20P56880 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CLDN20P56880 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.91■□□□□ 0.62
CLDN20P56880 AC090192.1-201ENST00000517740 490 ntBASIC18.91■□□□□ 0.62
CLDN20P56880 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CLDN20P56880 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN20P56880 AC073111.5-205ENST00000641717 521 ntBASIC18.91■□□□□ 0.62
CLDN20P56880 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN20P56880 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CLDN20P56880 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
CLDN20P56880 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN20P56880 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.91■□□□□ 0.62
CLDN20P56880 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN20P56880 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CLDN20P56880 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CLDN20P56880 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN20P56880 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.9■□□□□ 0.62
CLDN20P56880 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN20P56880 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN20P56880 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN20P56880 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN20P56880 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN20P56880 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN20P56880 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN20P56880 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN20P56880 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.9■□□□□ 0.62
CLDN20P56880 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.9■□□□□ 0.62
CLDN20P56880 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.9■□□□□ 0.62
CLDN20P56880 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.9■□□□□ 0.62
CLDN20P56880 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CLDN20P56880 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.9■□□□□ 0.62
CLDN20P56880 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN20P56880 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN20P56880 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CLDN20P56880 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN20P56880 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
CLDN20P56880 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.9■□□□□ 0.62
CLDN20P56880 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN20P56880 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.89■□□□□ 0.62
CLDN20P56880 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.89■□□□□ 0.61
CLDN20P56880 CDCA4P2-201ENST00000441182 718 ntBASIC18.89■□□□□ 0.61
CLDN20P56880 AC120498.10-201ENST00000621827 505 ntBASIC18.89■□□□□ 0.61
CLDN20P56880 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CLDN20P56880 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN20P56880 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.89■□□□□ 0.61
CLDN20P56880 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.89■□□□□ 0.61
CLDN20P56880 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN20P56880 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN20P56880 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN20P56880 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN20P56880 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.88■□□□□ 0.61
CLDN20P56880 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN20P56880 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN20P56880 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN20P56880 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN20P56880 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.88■□□□□ 0.61
CLDN20P56880 SLC7A5P1-201ENST00000568957 537 ntBASIC18.88■□□□□ 0.61
CLDN20P56880 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN20P56880 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms