Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CMC4P56277 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CMC4P56277 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CMC4P56277 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CMC4P56277 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CMC4P56277 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC15.41■□□□□ 0.06
CMC4P56277 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CMC4P56277 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CMC4P56277 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CMC4P56277 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CMC4P56277 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
CMC4P56277 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC15.41■□□□□ 0.06
CMC4P56277 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC15.41■□□□□ 0.06
CMC4P56277 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CMC4P56277 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
CMC4P56277 AC005181.1-201ENST00000604782 1256 ntBASIC15.41■□□□□ 0.06
CMC4P56277 AC100791.3-201ENST00000617619 330 ntBASIC15.41■□□□□ 0.06
CMC4P56277 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CMC4P56277 STK25-234ENST00000535007 2459 ntTSL 2 BASIC15.41■□□□□ 0.06
CMC4P56277 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CMC4P56277 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CMC4P56277 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CMC4P56277 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CMC4P56277 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
CMC4P56277 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CMC4P56277 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CMC4P56277 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC15.41■□□□□ 0.06
CMC4P56277 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CMC4P56277 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CMC4P56277 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CMC4P56277 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC15.4■□□□□ 0.06
CMC4P56277 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CMC4P56277 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CMC4P56277 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CMC4P56277 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CMC4P56277 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CMC4P56277 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CMC4P56277 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC15.4■□□□□ 0.06
CMC4P56277 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CMC4P56277 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC15.4■□□□□ 0.06
CMC4P56277 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
CMC4P56277 AL512625.2-201ENST00000417533 625 ntBASIC15.4■□□□□ 0.06
CMC4P56277 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CMC4P56277 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC15.4■□□□□ 0.06
CMC4P56277 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC15.4■□□□□ 0.06
CMC4P56277 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CMC4P56277 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CMC4P56277 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CMC4P56277 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CMC4P56277 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CMC4P56277 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CMC4P56277 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CMC4P56277 AL049796.1-201ENST00000565336 1766 ntBASIC15.39■□□□□ 0.05
CMC4P56277 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CMC4P56277 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CMC4P56277 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CMC4P56277 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CMC4P56277 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CMC4P56277 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
CMC4P56277 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC15.39■□□□□ 0.05
CMC4P56277 CDCA4P2-201ENST00000441182 718 ntBASIC15.39■□□□□ 0.05
CMC4P56277 AC006970.2-201ENST00000450065 779 ntBASIC15.39■□□□□ 0.05
CMC4P56277 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC15.39■□□□□ 0.05
CMC4P56277 AC133552.2-202ENST00000575694 574 ntBASIC15.39■□□□□ 0.05
CMC4P56277 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CMC4P56277 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CMC4P56277 AC068338.2-201ENST00000563278 1430 ntBASIC15.39■□□□□ 0.05
CMC4P56277 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CMC4P56277 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CMC4P56277 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CMC4P56277 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CMC4P56277 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CMC4P56277 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CMC4P56277 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
CMC4P56277 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CMC4P56277 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CMC4P56277 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CMC4P56277 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CMC4P56277 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CMC4P56277 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC15.38■□□□□ 0.05
CMC4P56277 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CMC4P56277 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CMC4P56277 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CMC4P56277 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CMC4P56277 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CMC4P56277 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC15.38■□□□□ 0.05
CMC4P56277 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
CMC4P56277 CNN2P6-201ENST00000439038 900 ntBASIC15.38■□□□□ 0.05
CMC4P56277 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CMC4P56277 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC15.38■□□□□ 0.05
CMC4P56277 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC15.38■□□□□ 0.05
CMC4P56277 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC15.38■□□□□ 0.05
CMC4P56277 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CMC4P56277 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
CMC4P56277 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
CMC4P56277 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CMC4P56277 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CMC4P56277 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CMC4P56277 LINC00565-201ENST00000562710 2331 ntBASIC15.38■□□□□ 0.05
CMC4P56277 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms