Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
EPHA4P54764 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
EPHA4P54764 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.95■□□□□ 0.78
EPHA4P54764 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
EPHA4P54764 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.95■□□□□ 0.78
EPHA4P54764 KRT18P68-201ENST00000392293 1000 ntBASIC19.95■□□□□ 0.78
EPHA4P54764 POU5F1P3-201ENST00000428824 1078 ntBASIC19.95■□□□□ 0.78
EPHA4P54764 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.95■□□□□ 0.78
EPHA4P54764 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.95■□□□□ 0.78
EPHA4P54764 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
EPHA4P54764 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.95■□□□□ 0.78
EPHA4P54764 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
EPHA4P54764 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
EPHA4P54764 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
EPHA4P54764 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
EPHA4P54764 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
EPHA4P54764 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
EPHA4P54764 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.95■□□□□ 0.78
EPHA4P54764 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
EPHA4P54764 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
EPHA4P54764 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
EPHA4P54764 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
EPHA4P54764 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
EPHA4P54764 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
EPHA4P54764 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.94■□□□□ 0.78
EPHA4P54764 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
EPHA4P54764 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.94■□□□□ 0.78
EPHA4P54764 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
EPHA4P54764 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.94■□□□□ 0.78
EPHA4P54764 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
EPHA4P54764 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
EPHA4P54764 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
EPHA4P54764 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
EPHA4P54764 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.94■□□□□ 0.78
EPHA4P54764 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.94■□□□□ 0.78
EPHA4P54764 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
EPHA4P54764 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
EPHA4P54764 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
EPHA4P54764 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
EPHA4P54764 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
EPHA4P54764 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
EPHA4P54764 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
EPHA4P54764 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
EPHA4P54764 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
EPHA4P54764 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
EPHA4P54764 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
EPHA4P54764 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
EPHA4P54764 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
EPHA4P54764 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
EPHA4P54764 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.93■□□□□ 0.78
EPHA4P54764 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
EPHA4P54764 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
EPHA4P54764 CYP21A1P-202ENST00000354927 1481 ntBASIC19.92■□□□□ 0.78
EPHA4P54764 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
EPHA4P54764 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.92■□□□□ 0.78
EPHA4P54764 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
EPHA4P54764 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
EPHA4P54764 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
EPHA4P54764 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.92■□□□□ 0.78
EPHA4P54764 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
EPHA4P54764 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
EPHA4P54764 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.92■□□□□ 0.78
EPHA4P54764 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
EPHA4P54764 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
EPHA4P54764 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.92■□□□□ 0.78
EPHA4P54764 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
EPHA4P54764 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
EPHA4P54764 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
EPHA4P54764 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
EPHA4P54764 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
EPHA4P54764 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
EPHA4P54764 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
EPHA4P54764 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
EPHA4P54764 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
EPHA4P54764 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
EPHA4P54764 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
EPHA4P54764 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.91■□□□□ 0.78
EPHA4P54764 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.91■□□□□ 0.78
EPHA4P54764 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.91■□□□□ 0.78
EPHA4P54764 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.91■□□□□ 0.78
EPHA4P54764 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.91■□□□□ 0.78
EPHA4P54764 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
EPHA4P54764 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.91■□□□□ 0.78
EPHA4P54764 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
EPHA4P54764 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
EPHA4P54764 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
EPHA4P54764 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
EPHA4P54764 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
EPHA4P54764 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
EPHA4P54764 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
EPHA4P54764 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
EPHA4P54764 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
EPHA4P54764 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
EPHA4P54764 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
EPHA4P54764 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.9■□□□□ 0.78
EPHA4P54764 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.9■□□□□ 0.78
EPHA4P54764 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
EPHA4P54764 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.9■□□□□ 0.78
EPHA4P54764 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.9■□□□□ 0.78
EPHA4P54764 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms