Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.3■■□□□ 1
PMS2P54278 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PMS2P54278 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.3■■□□□ 1
PMS2P54278 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
PMS2P54278 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.3■■□□□ 1
PMS2P54278 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PMS2P54278 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PMS2P54278 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
PMS2P54278 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.29■■□□□ 1
PMS2P54278 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.29■■□□□ 1
PMS2P54278 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PMS2P54278 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.29■■□□□ 1
PMS2P54278 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.29■■□□□ 1
PMS2P54278 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
PMS2P54278 AL162377.1-201ENST00000618844 1793 ntBASIC21.29■■□□□ 1
PMS2P54278 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.29■■□□□ 1
PMS2P54278 SERBP1P1-201ENST00000396021 1160 ntBASIC21.29■■□□□ 1
PMS2P54278 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
PMS2P54278 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.29■■□□□ 1
PMS2P54278 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
PMS2P54278 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.29■■□□□ 1
PMS2P54278 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PMS2P54278 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PMS2P54278 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
PMS2P54278 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PMS2P54278 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
PMS2P54278 AL512408.1-201ENST00000569378 2000 ntBASIC21.28■■□□□ 1
PMS2P54278 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PMS2P54278 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
PMS2P54278 RASA4CP-201ENST00000424092 1398 ntBASIC21.28■■□□□ 1
PMS2P54278 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
PMS2P54278 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PMS2P54278 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
PMS2P54278 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
PMS2P54278 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.28■■□□□ 1
PMS2P54278 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PMS2P54278 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.28■■□□□ 1
PMS2P54278 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.28■■□□□ 1
PMS2P54278 AP005435.1-201ENST00000529293 1178 ntBASIC21.28■■□□□ 1
PMS2P54278 AC027682.1-201ENST00000562846 899 ntBASIC21.28■■□□□ 1
PMS2P54278 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.28■■□□□ 1
PMS2P54278 AL138724.1-201ENST00000606771 1088 ntBASIC21.28■■□□□ 1
PMS2P54278 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.28■■□□□ 1
PMS2P54278 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.28■■□□□ 1
PMS2P54278 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PMS2P54278 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.28■■□□□ 1
PMS2P54278 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.28■■□□□ 1
PMS2P54278 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PMS2P54278 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PMS2P54278 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.28■■□□□ 1
PMS2P54278 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.28■■□□□ 1
PMS2P54278 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.28■■□□□ 1
PMS2P54278 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PMS2P54278 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
PMS2P54278 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.27■■□□□ 1
PMS2P54278 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.27■■□□□ 1
PMS2P54278 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PMS2P54278 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PMS2P54278 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.27■■□□□ 1
PMS2P54278 AC097381.1-201ENST00000429019 1296 ntBASIC21.27■■□□□ 1
PMS2P54278 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.27■■□□□ 1
PMS2P54278 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
PMS2P54278 AC011298.3-201ENST00000615796 283 ntBASIC21.27■■□□□ 1
PMS2P54278 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PMS2P54278 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PMS2P54278 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
PMS2P54278 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.27■■□□□ 1
PMS2P54278 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
PMS2P54278 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.27■■□□□ 1
PMS2P54278 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PMS2P54278 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
PMS2P54278 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.26■□□□□ 0.99
PMS2P54278 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PMS2P54278 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PMS2P54278 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
PMS2P54278 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.26■□□□□ 0.99
PMS2P54278 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PMS2P54278 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.26■□□□□ 0.99
PMS2P54278 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PMS2P54278 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PMS2P54278 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PMS2P54278 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PMS2P54278 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PMS2P54278 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.26■□□□□ 0.99
PMS2P54278 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PMS2P54278 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PMS2P54278 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
PMS2P54278 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.25■□□□□ 0.99
PMS2P54278 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PMS2P54278 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PMS2P54278 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PMS2P54278 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
PMS2P54278 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PMS2P54278 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
PMS2P54278 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.25■□□□□ 0.99
PMS2P54278 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.25■□□□□ 0.99
PMS2P54278 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.25■□□□□ 0.99
PMS2P54278 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PMS2P54278 FP700111.2-201ENST00000619190 1892 ntBASIC21.25■□□□□ 0.99
PMS2P54278 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms