Protein–RNA interactions for Protein: P53538

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, yeastyeast

Predicted RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSU72P53538 SAS2YMR127C 1017 nt2.06□□□□□ -2.08
SSU72P53538 GRX5YPL059W 453 nt2.06□□□□□ -2.08
SSU72P53538 RSA1YPL193W 1146 nt2.06□□□□□ -2.08
SSU72P53538 RPC40YPR110C 1008 nt2.06□□□□□ -2.08
SSU72P53538 RSE1YML049C 4086 nt2.06□□□□□ -2.08
SSU72P53538 NUR1YDL089W 1455 nt2.06□□□□□ -2.08
SSU72P53538 RGA2YDR379W 3030 nt2.06□□□□□ -2.08
SSU72P53538 YRR1YOR162C 2433 nt2.06□□□□□ -2.08
SSU72P53538 VPS13YLL040C 9435 nt2.05□□□□□ -2.08
SSU72P53538 SNX41YDR425W 1878 nt2.05□□□□□ -2.08
SSU72P53538 YOL098CYOL098C 3114 nt2.05□□□□□ -2.08
SSU72P53538 UBC13YDR092W 462 nt2.05□□□□□ -2.08
SSU72P53538 RSM24YDR175C 960 nt2.05□□□□□ -2.08
SSU72P53538 SLD5YDR489W 885 nt2.05□□□□□ -2.08
SSU72P53538 RMD6YEL072W 696 nt2.05□□□□□ -2.08
SSU72P53538 YER046W-AYER046W-A 330 nt2.05□□□□□ -2.08
SSU72P53538 YDR261W-AYDR261W-A 1317 nt2.05□□□□□ -2.08
SSU72P53538 COS111YBR203W 2775 nt2.05□□□□□ -2.08
SSU72P53538 DNA2YHR164C 4569 nt2.05□□□□□ -2.08
SSU72P53538 YCT1YLL055W 1596 nt2.05□□□□□ -2.08
SSU72P53538 ARK1YNL020C 1917 nt2.05□□□□□ -2.08
SSU72P53538 YJL132WYJL132W 2253 nt2.05□□□□□ -2.08
SSU72P53538 YDR203WYDR203W 318 nt2.04□□□□□ -2.08
SSU72P53538 YFR054CYFR054C 579 nt2.04□□□□□ -2.08
SSU72P53538 VEL1YGL258W 621 nt2.04□□□□□ -2.08
SSU72P53538 BTN2YGR142W 1233 nt2.04□□□□□ -2.08
SSU72P53538 SPO11YHL022C 1197 nt2.04□□□□□ -2.08
SSU72P53538 RRF1YHR038W 693 nt2.04□□□□□ -2.08
SSU72P53538 YAL031W-AYAL031W-A 309 nt2.04□□□□□ -2.08
SSU72P53538 YLR217WYLR217W 324 nt2.04□□□□□ -2.08
SSU72P53538 POM152YMR129W 4014 nt2.04□□□□□ -2.08
SSU72P53538 FUS2YMR232W 2034 nt2.04□□□□□ -2.08
SSU72P53538 DYN3YMR299C 939 nt2.04□□□□□ -2.08
SSU72P53538 SME1YOR159C 285 nt2.04□□□□□ -2.08
SSU72P53538 ERT1YBR239C 1590 nt2.04□□□□□ -2.08
SSU72P53538 YBR287WYBR287W 1284 nt2.04□□□□□ -2.08
SSU72P53538 PDS5YMR076C 3834 nt2.03□□□□□ -2.08
SSU72P53538 AYT1YLL063C 1425 nt2.03□□□□□ -2.08
SSU72P53538 VPS38YLR360W 1320 nt2.03□□□□□ -2.08
SSU72P53538 SRD1YCR018C 666 nt2.03□□□□□ -2.08
SSU72P53538 APC11YDL008W 498 nt2.03□□□□□ -2.08
SSU72P53538 snR83snR83 306 nt2.03□□□□□ -2.08
SSU72P53538 STE2YFL026W 1296 nt2.03□□□□□ -2.08
SSU72P53538 MVB12YGR206W 306 nt2.03□□□□□ -2.08
SSU72P53538 YJL156W-AYJL156W-A 222 nt2.03□□□□□ -2.08
SSU72P53538 VPH2YKL119C 648 nt2.03□□□□□ -2.08
SSU72P53538 TPK3YKL166C 1197 nt2.03□□□□□ -2.08
SSU72P53538 YLR224WYLR224W 1110 nt2.03□□□□□ -2.08
SSU72P53538 YBL029C-AYBL029C-A 285 nt2.03□□□□□ -2.08
SSU72P53538 YOR277CYOR277C 309 nt2.03□□□□□ -2.08
SSU72P53538 NOP12YOL041C 1380 nt2.02□□□□□ -2.09
SSU72P53538 SIR4YDR227W 4077 nt2.02□□□□□ -2.09
SSU72P53538 SLF1YDR515W 1344 nt2.02□□□□□ -2.09
SSU72P53538 APC2YLR127C 2562 nt2.02□□□□□ -2.09
SSU72P53538 MPO1YGL010W 525 nt2.02□□□□□ -2.09
SSU72P53538 YHL044WYHL044W 708 nt2.02□□□□□ -2.09
SSU72P53538 YLR154W-EYLR154W-E 204 nt2.02□□□□□ -2.09
SSU72P53538 ARC18YLR370C 537 nt2.02□□□□□ -2.09
SSU72P53538 YMR181CYMR181C 465 nt2.02□□□□□ -2.09
SSU72P53538 YOR050CYOR050C 348 nt2.02□□□□□ -2.09
SSU72P53538 YOR055WYOR055W 435 nt2.02□□□□□ -2.09
SSU72P53538 YRO2YBR054W 1035 nt2.02□□□□□ -2.09
SSU72P53538 YPL142CYPL142C 318 nt2.02□□□□□ -2.09
SSU72P53538 MRPL40YPL173W 894 nt2.02□□□□□ -2.09
SSU72P53538 RRP15YPR143W 753 nt2.02□□□□□ -2.09
SSU72P53538 RXT2YBR095C 1293 nt2.02□□□□□ -2.09
SSU72P53538 MED8YBR193C 672 nt2.02□□□□□ -2.09
SSU72P53538 SHG1YBR258C 429 nt2.02□□□□□ -2.09
SSU72P53538 SMC6YLR383W 3345 nt2.02□□□□□ -2.09
SSU72P53538 ALY1YKR021W 2748 nt2.02□□□□□ -2.09
SSU72P53538 CDC37YDR168W 1521 nt2.01□□□□□ -2.09
SSU72P53538 URK1YNR012W 1506 nt2.01□□□□□ -2.09
SSU72P53538 UBR1YGR184C 5853 nt2.01□□□□□ -2.09
SSU72P53538 NSE4YDL105W 1209 nt2.01□□□□□ -2.09
SSU72P53538 RAV2YDR202C 1056 nt2.01□□□□□ -2.09
SSU72P53538 YER158W-AYER158W-A 216 nt2.01□□□□□ -2.09
SSU72P53538 YGR115CYGR115C 780 nt2.01□□□□□ -2.09
SSU72P53538 GRE2YOL151W 1029 nt2.01□□□□□ -2.09
SSU72P53538 ARF3YOR094W 552 nt2.01□□□□□ -2.09
SSU72P53538 BRE5YNR051C 1548 nt2.01□□□□□ -2.09
SSU72P53538 SCD5YOR329C 2619 nt2.01□□□□□ -2.09
SSU72P53538 SCP160YJL080C 3669 nt2.01□□□□□ -2.09
SSU72P53538 JJJ2YJL162C 1752 nt2□□□□□ -2.09
SSU72P53538 PDR3YBL005W 2931 nt2□□□□□ -2.09
SSU72P53538 SKP2YNL311C 2292 nt2□□□□□ -2.09
SSU72P53538 CBF2YGR140W 2871 nt2□□□□□ -2.09
SSU72P53538 YER119C-AYER119C-A 372 nt2□□□□□ -2.09
SSU72P53538 YGR283CYGR283C 1026 nt2□□□□□ -2.09
SSU72P53538 PEX18YHR160C 852 nt2□□□□□ -2.09
SSU72P53538 tW(CCA)G1tW(CCA)G1 72 nt2□□□□□ -2.09
SSU72P53538 tW(CCA)G2tW(CCA)G2 72 nt2□□□□□ -2.09
SSU72P53538 tW(CCA)JtW(CCA)J 72 nt2□□□□□ -2.09
SSU72P53538 tW(CCA)KtW(CCA)K 72 nt2□□□□□ -2.09
SSU72P53538 tW(CCA)MtW(CCA)M 72 nt2□□□□□ -2.09
SSU72P53538 tW(CCA)PtW(CCA)P 72 nt2□□□□□ -2.09
SSU72P53538 YJR020WYJR020W 333 nt2□□□□□ -2.09
SSU72P53538 BET3YKR068C 582 nt2□□□□□ -2.09
SSU72P53538 URA5YML106W 681 nt2□□□□□ -2.09
SSU72P53538 IST2YBR086C 2841 nt2□□□□□ -2.09
SSU72P53538 SVL3YPL032C 2478 nt2□□□□□ -2.09
Retrieved 100 of 7,029 protein–RNA pairs in 20.7 ms