Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.1■□□□□ 0.81
PDX1P52945 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
PDX1P52945 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.1■□□□□ 0.81
PDX1P52945 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.09■□□□□ 0.81
PDX1P52945 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PDX1P52945 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDX1P52945 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.09■□□□□ 0.81
PDX1P52945 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PDX1P52945 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.09■□□□□ 0.81
PDX1P52945 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
PDX1P52945 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
PDX1P52945 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.09■□□□□ 0.81
PDX1P52945 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.09■□□□□ 0.81
PDX1P52945 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.09■□□□□ 0.81
PDX1P52945 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.09■□□□□ 0.81
PDX1P52945 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.09■□□□□ 0.81
PDX1P52945 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDX1P52945 AC006058.3-201ENST00000606217 1069 ntBASIC20.09■□□□□ 0.81
PDX1P52945 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.09■□□□□ 0.81
PDX1P52945 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PDX1P52945 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDX1P52945 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDX1P52945 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDX1P52945 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDX1P52945 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
PDX1P52945 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDX1P52945 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PDX1P52945 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PDX1P52945 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PDX1P52945 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.08■□□□□ 0.81
PDX1P52945 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PDX1P52945 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PDX1P52945 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.08■□□□□ 0.81
PDX1P52945 AC128676.1-201ENST00000454392 318 ntBASIC20.08■□□□□ 0.81
PDX1P52945 UNC93B5-201ENST00000530315 699 ntBASIC20.08■□□□□ 0.81
PDX1P52945 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.08■□□□□ 0.81
PDX1P52945 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
PDX1P52945 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.08■□□□□ 0.8
PDX1P52945 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.08■□□□□ 0.8
PDX1P52945 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PDX1P52945 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.8
PDX1P52945 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDX1P52945 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
PDX1P52945 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDX1P52945 KRT17P1-201ENST00000399211 1546 ntBASIC20.07■□□□□ 0.8
PDX1P52945 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDX1P52945 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PDX1P52945 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PDX1P52945 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
PDX1P52945 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.07■□□□□ 0.8
PDX1P52945 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PDX1P52945 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PDX1P52945 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.07■□□□□ 0.8
PDX1P52945 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.07■□□□□ 0.8
PDX1P52945 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PDX1P52945 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PDX1P52945 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.07■□□□□ 0.8
PDX1P52945 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.07■□□□□ 0.8
PDX1P52945 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDX1P52945 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDX1P52945 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDX1P52945 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDX1P52945 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDX1P52945 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDX1P52945 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
PDX1P52945 AC091799.1-201ENST00000422823 811 ntBASIC20.06■□□□□ 0.8
PDX1P52945 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.06■□□□□ 0.8
PDX1P52945 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PDX1P52945 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.06■□□□□ 0.8
PDX1P52945 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.06■□□□□ 0.8
PDX1P52945 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDX1P52945 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDX1P52945 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDX1P52945 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDX1P52945 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PDX1P52945 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDX1P52945 FAM99A-202ENST00000538190 1989 ntBASIC20.05■□□□□ 0.8
PDX1P52945 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.05■□□□□ 0.8
PDX1P52945 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PDX1P52945 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDX1P52945 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PDX1P52945 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.05■□□□□ 0.8
PDX1P52945 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.05■□□□□ 0.8
PDX1P52945 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PDX1P52945 AC026366.1-201ENST00000488803 879 ntBASIC20.05■□□□□ 0.8
PDX1P52945 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.05■□□□□ 0.8
PDX1P52945 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PDX1P52945 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDX1P52945 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDX1P52945 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDX1P52945 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDX1P52945 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDX1P52945 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.05■□□□□ 0.8
PDX1P52945 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDX1P52945 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDX1P52945 AC010542.4-201ENST00000563151 1910 ntBASIC20.04■□□□□ 0.8
PDX1P52945 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDX1P52945 AL355472.2-201ENST00000422958 438 ntBASIC20.04■□□□□ 0.8
PDX1P52945 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDX1P52945 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms