Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CDR1P51861 AC010141.2-201ENST00000452426 721 ntBASIC22.5■■□□□ 1.19
CDR1P51861 PPP1R14BP3-201ENST00000509033 445 ntBASIC22.5■■□□□ 1.19
CDR1P51861 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC22.5■■□□□ 1.19
CDR1P51861 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC22.5■■□□□ 1.19
CDR1P51861 MYCNOS-205ENST00000641950 531 ntBASIC22.5■■□□□ 1.19
CDR1P51861 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CDR1P51861 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC22.5■■□□□ 1.19
CDR1P51861 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CDR1P51861 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC22.5■■□□□ 1.19
CDR1P51861 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC22.49■■□□□ 1.19
CDR1P51861 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CDR1P51861 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CDR1P51861 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CDR1P51861 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CDR1P51861 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CDR1P51861 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC22.49■■□□□ 1.19
CDR1P51861 DUX4L16-201ENST00000555130 1264 ntBASIC22.49■■□□□ 1.19
CDR1P51861 EEF1DP3-203ENST00000566025 782 ntBASIC22.49■■□□□ 1.19
CDR1P51861 AC138907.5-202ENST00000569484 235 ntBASIC22.49■■□□□ 1.19
CDR1P51861 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22.49■■□□□ 1.19
CDR1P51861 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.49■■□□□ 1.19
CDR1P51861 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC22.49■■□□□ 1.19
CDR1P51861 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC22.49■■□□□ 1.19
CDR1P51861 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CDR1P51861 GAS2L1P2-201ENST00000436355 1356 ntBASIC22.49■■□□□ 1.19
CDR1P51861 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
CDR1P51861 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CDR1P51861 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
CDR1P51861 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CDR1P51861 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CDR1P51861 AC061975.6-201ENST00000579045 1553 ntBASIC22.48■■□□□ 1.19
CDR1P51861 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CDR1P51861 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
CDR1P51861 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CDR1P51861 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CDR1P51861 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC22.48■■□□□ 1.19
CDR1P51861 AC006970.2-201ENST00000450065 779 ntBASIC22.48■■□□□ 1.19
CDR1P51861 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC22.48■■□□□ 1.19
CDR1P51861 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC22.48■■□□□ 1.19
CDR1P51861 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC22.48■■□□□ 1.19
CDR1P51861 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CDR1P51861 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CDR1P51861 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC22.48■■□□□ 1.19
CDR1P51861 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CDR1P51861 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC22.48■■□□□ 1.19
CDR1P51861 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
CDR1P51861 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDR1P51861 AC092667.1-201ENST00000434301 2586 ntBASIC22.47■■□□□ 1.19
CDR1P51861 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CDR1P51861 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDR1P51861 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDR1P51861 AC026310.3-201ENST00000625186 2373 ntBASIC22.47■■□□□ 1.19
CDR1P51861 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC22.47■■□□□ 1.19
CDR1P51861 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC22.47■■□□□ 1.19
CDR1P51861 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC22.47■■□□□ 1.19
CDR1P51861 BMP1-204ENST00000397814 836 ntTSL 4 BASIC22.47■■□□□ 1.19
CDR1P51861 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
CDR1P51861 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CDR1P51861 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC22.47■■□□□ 1.19
CDR1P51861 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CDR1P51861 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC22.47■■□□□ 1.19
CDR1P51861 AL050303.2-201ENST00000619798 666 ntBASIC22.47■■□□□ 1.19
CDR1P51861 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDR1P51861 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDR1P51861 AC073130.3-201ENST00000624389 2278 ntBASIC22.47■■□□□ 1.19
CDR1P51861 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CDR1P51861 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDR1P51861 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CDR1P51861 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDR1P51861 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDR1P51861 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDR1P51861 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CDR1P51861 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CDR1P51861 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC22.46■■□□□ 1.19
CDR1P51861 RARG-204ENST00000543726 1779 ntTSL 2 BASIC22.46■■□□□ 1.19
CDR1P51861 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC22.46■■□□□ 1.19
CDR1P51861 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CDR1P51861 DENND3-207ENST00000518347 850 ntTSL 2 BASIC22.46■■□□□ 1.19
CDR1P51861 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC22.46■■□□□ 1.19
CDR1P51861 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC22.46■■□□□ 1.19
CDR1P51861 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CDR1P51861 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CDR1P51861 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CDR1P51861 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CDR1P51861 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CDR1P51861 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC22.46■■□□□ 1.19
CDR1P51861 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CDR1P51861 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC22.45■■□□□ 1.18
CDR1P51861 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CDR1P51861 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
CDR1P51861 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CDR1P51861 UQCRFS1P1-201ENST00000435169 820 ntBASIC22.45■■□□□ 1.18
CDR1P51861 KRT18P11-201ENST00000435214 1283 ntBASIC22.45■■□□□ 1.18
CDR1P51861 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CDR1P51861 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC22.45■■□□□ 1.18
CDR1P51861 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC22.45■■□□□ 1.18
CDR1P51861 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC22.45■■□□□ 1.18
CDR1P51861 AC053503.5-201ENST00000601508 636 ntBASIC22.45■■□□□ 1.18
CDR1P51861 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC22.45■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms