Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.85■■□□□ 1.09
CLCN4P51793 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.85■■□□□ 1.09
CLCN4P51793 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
CLCN4P51793 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.85■■□□□ 1.09
CLCN4P51793 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CLCN4P51793 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.85■■□□□ 1.09
CLCN4P51793 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.85■■□□□ 1.09
CLCN4P51793 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.85■■□□□ 1.09
CLCN4P51793 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.85■■□□□ 1.09
CLCN4P51793 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLCN4P51793 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.85■■□□□ 1.09
CLCN4P51793 SOX15-203ENST00000570788 1093 ntBASIC21.85■■□□□ 1.09
CLCN4P51793 AC233263.1-201ENST00000578059 224 ntBASIC21.85■■□□□ 1.09
CLCN4P51793 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.85■■□□□ 1.09
CLCN4P51793 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.85■■□□□ 1.09
CLCN4P51793 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLCN4P51793 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CLCN4P51793 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLCN4P51793 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.85■■□□□ 1.09
CLCN4P51793 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLCN4P51793 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLCN4P51793 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLCN4P51793 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.84■■□□□ 1.09
CLCN4P51793 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLCN4P51793 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLCN4P51793 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLCN4P51793 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLCN4P51793 MIR718-201ENST00000390190 70 ntBASIC21.84■■□□□ 1.09
CLCN4P51793 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CLCN4P51793 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLCN4P51793 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC21.84■■□□□ 1.09
CLCN4P51793 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.84■■□□□ 1.09
CLCN4P51793 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLCN4P51793 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.84■■□□□ 1.09
CLCN4P51793 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLCN4P51793 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLCN4P51793 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLCN4P51793 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLCN4P51793 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.84■■□□□ 1.09
CLCN4P51793 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLCN4P51793 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CLCN4P51793 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CLCN4P51793 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CLCN4P51793 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CLCN4P51793 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CLCN4P51793 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CLCN4P51793 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CLCN4P51793 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CLCN4P51793 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CLCN4P51793 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.83■■□□□ 1.09
CLCN4P51793 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.83■■□□□ 1.09
CLCN4P51793 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.83■■□□□ 1.09
CLCN4P51793 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.83■■□□□ 1.09
CLCN4P51793 AC105020.6-201ENST00000621523 1217 ntBASIC21.83■■□□□ 1.09
CLCN4P51793 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.83■■□□□ 1.09
CLCN4P51793 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CLCN4P51793 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CLCN4P51793 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CLCN4P51793 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.83■■□□□ 1.08
CLCN4P51793 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CLCN4P51793 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.83■■□□□ 1.08
CLCN4P51793 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CLCN4P51793 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLCN4P51793 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.82■■□□□ 1.08
CLCN4P51793 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.82■■□□□ 1.08
CLCN4P51793 GUSBP5-202ENST00000510805 1989 ntBASIC21.82■■□□□ 1.08
CLCN4P51793 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
CLCN4P51793 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.82■■□□□ 1.08
CLCN4P51793 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.82■■□□□ 1.08
CLCN4P51793 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.82■■□□□ 1.08
CLCN4P51793 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLCN4P51793 AC069544.1-201ENST00000609399 999 ntBASIC21.82■■□□□ 1.08
CLCN4P51793 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CLCN4P51793 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLCN4P51793 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CLCN4P51793 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLCN4P51793 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CLCN4P51793 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLCN4P51793 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLCN4P51793 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLCN4P51793 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.82■■□□□ 1.08
CLCN4P51793 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CLCN4P51793 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
CLCN4P51793 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.81■■□□□ 1.08
CLCN4P51793 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
CLCN4P51793 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLCN4P51793 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CLCN4P51793 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CLCN4P51793 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.81■■□□□ 1.08
CLCN4P51793 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.81■■□□□ 1.08
CLCN4P51793 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.81■■□□□ 1.08
CLCN4P51793 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLCN4P51793 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CLCN4P51793 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CLCN4P51793 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLCN4P51793 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
CLCN4P51793 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLCN4P51793 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLCN4P51793 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.8■■□□□ 1.08
CLCN4P51793 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms