Protein–RNA interactions for Protein: P51608

MECP2, Methyl-CpG-binding protein 2, humanhuman

Known RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2P51608 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MECP2P51608 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MECP2P51608 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MECP2P51608 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
MECP2P51608 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
MECP2P51608 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.6■□□□□ 0.41
MECP2P51608 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MECP2P51608 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
MECP2P51608 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.59■□□□□ 0.41
MECP2P51608 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MECP2P51608 AC112907.3-201ENST00000577781 2400 ntBASIC17.59■□□□□ 0.41
MECP2P51608 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.59■□□□□ 0.41
MECP2P51608 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.59■□□□□ 0.41
MECP2P51608 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MECP2P51608 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
MECP2P51608 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
MECP2P51608 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
MECP2P51608 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MECP2P51608 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC17.59■□□□□ 0.41
MECP2P51608 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MECP2P51608 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MECP2P51608 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC17.59■□□□□ 0.41
MECP2P51608 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MECP2P51608 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MECP2P51608 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
MECP2P51608 AC092028.1-203ENST00000608262 953 ntBASIC17.59■□□□□ 0.41
MECP2P51608 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MECP2P51608 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
MECP2P51608 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
MECP2P51608 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MECP2P51608 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MECP2P51608 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MECP2P51608 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.58■□□□□ 0.41
MECP2P51608 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.41
MECP2P51608 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
MECP2P51608 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
MECP2P51608 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
MECP2P51608 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
MECP2P51608 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
MECP2P51608 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
MECP2P51608 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MECP2P51608 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MECP2P51608 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
MECP2P51608 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC17.58■□□□□ 0.4
MECP2P51608 AL499627.2-201ENST00000606283 725 ntBASIC17.58■□□□□ 0.4
MECP2P51608 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.58■□□□□ 0.4
MECP2P51608 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
MECP2P51608 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
MECP2P51608 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
MECP2P51608 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MECP2P51608 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
MECP2P51608 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MECP2P51608 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.58■□□□□ 0.4
MECP2P51608 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.58■□□□□ 0.4
MECP2P51608 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MECP2P51608 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MECP2P51608 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
MECP2P51608 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
MECP2P51608 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MECP2P51608 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
MECP2P51608 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MECP2P51608 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
MECP2P51608 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MECP2P51608 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.57■□□□□ 0.4
MECP2P51608 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC17.57■□□□□ 0.4
MECP2P51608 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MECP2P51608 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.57■□□□□ 0.4
MECP2P51608 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC17.57■□□□□ 0.4
MECP2P51608 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
MECP2P51608 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.57■□□□□ 0.4
MECP2P51608 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MECP2P51608 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
MECP2P51608 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
MECP2P51608 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MECP2P51608 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MECP2P51608 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
MECP2P51608 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
MECP2P51608 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
MECP2P51608 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MECP2P51608 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MECP2P51608 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.57■□□□□ 0.4
MECP2P51608 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MECP2P51608 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MECP2P51608 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.56■□□□□ 0.4
MECP2P51608 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
MECP2P51608 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MECP2P51608 AC116562.4-201ENST00000641316 2276 ntBASIC17.56■□□□□ 0.4
MECP2P51608 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
MECP2P51608 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
MECP2P51608 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
MECP2P51608 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
MECP2P51608 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MECP2P51608 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
MECP2P51608 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.56■□□□□ 0.4
MECP2P51608 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.56■□□□□ 0.4
MECP2P51608 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.56■□□□□ 0.4
MECP2P51608 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
MECP2P51608 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
MECP2P51608 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MECP2P51608 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms