Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.77■■□□□ 1.08
TUBP50607 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.77■■□□□ 1.08
TUBP50607 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
TUBP50607 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TUBP50607 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TUBP50607 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.77■■□□□ 1.08
TUBP50607 AC244015.2-201ENST00000616358 1861 ntBASIC21.77■■□□□ 1.08
TUBP50607 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.07
TUBP50607 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
TUBP50607 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.76■■□□□ 1.07
TUBP50607 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TUBP50607 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TUBP50607 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TUBP50607 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.76■■□□□ 1.07
TUBP50607 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TUBP50607 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
TUBP50607 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TUBP50607 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
TUBP50607 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TUBP50607 AC073210.2-201ENST00000430369 194 ntBASIC21.76■■□□□ 1.07
TUBP50607 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.76■■□□□ 1.07
TUBP50607 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TUBP50607 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.76■■□□□ 1.07
TUBP50607 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.76■■□□□ 1.07
TUBP50607 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TUBP50607 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.76■■□□□ 1.07
TUBP50607 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
TUBP50607 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TUBP50607 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TUBP50607 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TUBP50607 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
TUBP50607 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TUBP50607 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.75■■□□□ 1.07
TUBP50607 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
TUBP50607 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TUBP50607 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TUBP50607 AC091799.1-201ENST00000422823 811 ntBASIC21.75■■□□□ 1.07
TUBP50607 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.75■■□□□ 1.07
TUBP50607 RARRES2P4-201ENST00000514074 484 ntBASIC21.75■■□□□ 1.07
TUBP50607 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.75■■□□□ 1.07
TUBP50607 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.75■■□□□ 1.07
TUBP50607 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.75■■□□□ 1.07
TUBP50607 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.75■■□□□ 1.07
TUBP50607 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TUBP50607 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.74■■□□□ 1.07
TUBP50607 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.74■■□□□ 1.07
TUBP50607 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.74■■□□□ 1.07
TUBP50607 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TUBP50607 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.74■■□□□ 1.07
TUBP50607 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TUBP50607 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TUBP50607 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.74■■□□□ 1.07
TUBP50607 MKRN4P-201ENST00000444706 1521 ntBASIC21.74■■□□□ 1.07
TUBP50607 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TUBP50607 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TUBP50607 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TUBP50607 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
TUBP50607 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.73■■□□□ 1.07
TUBP50607 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.73■■□□□ 1.07
TUBP50607 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.73■■□□□ 1.07
TUBP50607 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
TUBP50607 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
TUBP50607 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
TUBP50607 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
TUBP50607 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TUBP50607 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.73■■□□□ 1.07
TUBP50607 AL138781.1-201ENST00000566567 1274 ntBASIC21.73■■□□□ 1.07
TUBP50607 AC016405.3-201ENST00000607710 860 ntBASIC21.73■■□□□ 1.07
TUBP50607 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
TUBP50607 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
TUBP50607 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TUBP50607 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.73■■□□□ 1.07
TUBP50607 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.72■■□□□ 1.07
TUBP50607 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
TUBP50607 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
TUBP50607 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TUBP50607 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TUBP50607 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TUBP50607 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
TUBP50607 AC069152.1-201ENST00000438030 544 ntBASIC21.72■■□□□ 1.07
TUBP50607 AC093787.1-201ENST00000450396 207 ntBASIC21.72■■□□□ 1.07
TUBP50607 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TUBP50607 FAM21FP-204ENST00000608637 956 ntBASIC21.72■■□□□ 1.07
TUBP50607 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
TUBP50607 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
TUBP50607 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TUBP50607 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
TUBP50607 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TUBP50607 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TUBP50607 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
TUBP50607 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TUBP50607 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.71■■□□□ 1.07
TUBP50607 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TUBP50607 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
TUBP50607 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
TUBP50607 AC092667.1-201ENST00000434301 2586 ntBASIC21.71■■□□□ 1.07
TUBP50607 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TUBP50607 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
TUBP50607 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.71■■□□□ 1.07
TUBP50607 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms