Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC16.31■□□□□ 0.2
CDC34P49427 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC16.31■□□□□ 0.2
CDC34P49427 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.31■□□□□ 0.2
CDC34P49427 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CDC34P49427 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC34P49427 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CDC34P49427 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CDC34P49427 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CDC34P49427 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
CDC34P49427 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
CDC34P49427 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC34P49427 NARF-205ENST00000412079 1760 ntTSL 5 BASIC16.31■□□□□ 0.2
CDC34P49427 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC34P49427 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC34P49427 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC34P49427 AL020996.1-203ENST00000536896 2307 ntBASIC16.3■□□□□ 0.2
CDC34P49427 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC34P49427 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC34P49427 SMG8-203ENST00000578922 2178 ntBASIC16.3■□□□□ 0.2
CDC34P49427 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC34P49427 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC34P49427 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC34P49427 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC16.3■□□□□ 0.2
CDC34P49427 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC34P49427 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC34P49427 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC16.3■□□□□ 0.2
CDC34P49427 AL117332.1-201ENST00000622628 974 ntBASIC16.3■□□□□ 0.2
CDC34P49427 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
CDC34P49427 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC34P49427 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.3■□□□□ 0.2
CDC34P49427 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
CDC34P49427 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CDC34P49427 AL512408.1-201ENST00000569378 2000 ntBASIC16.29■□□□□ 0.2
CDC34P49427 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC34P49427 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC34P49427 BID-203ENST00000399765 1879 ntTSL 2 BASIC16.29■□□□□ 0.2
CDC34P49427 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC34P49427 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC34P49427 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC16.29■□□□□ 0.2
CDC34P49427 AL162377.1-201ENST00000618844 1793 ntBASIC16.29■□□□□ 0.2
CDC34P49427 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CDC34P49427 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.29■□□□□ 0.2
CDC34P49427 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC34P49427 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CDC34P49427 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CDC34P49427 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC34P49427 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDC34P49427 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC16.29■□□□□ 0.2
CDC34P49427 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDC34P49427 EXOG-217ENST00000630638 197 ntTSL 5 BASIC16.29■□□□□ 0.2
CDC34P49427 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CDC34P49427 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC34P49427 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC34P49427 STX5-203ENST00000394690 1568 ntTSL 5 BASIC16.29■□□□□ 0.2
CDC34P49427 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CDC34P49427 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDC34P49427 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC34P49427 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC16.29■□□□□ 0.2
CDC34P49427 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
CDC34P49427 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CDC34P49427 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC34P49427 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.28■□□□□ 0.2
CDC34P49427 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC34P49427 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC34P49427 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CDC34P49427 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.28■□□□□ 0.2
CDC34P49427 OR2I1P-207ENST00000453522 948 ntBASIC16.28■□□□□ 0.2
CDC34P49427 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.28■□□□□ 0.2
CDC34P49427 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
CDC34P49427 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CDC34P49427 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC34P49427 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC34P49427 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.28■□□□□ 0.2
CDC34P49427 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC34P49427 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC34P49427 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC16.28■□□□□ 0.2
CDC34P49427 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDC34P49427 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDC34P49427 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDC34P49427 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
CDC34P49427 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDC34P49427 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDC34P49427 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDC34P49427 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDC34P49427 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDC34P49427 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CDC34P49427 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDC34P49427 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC16.27■□□□□ 0.2
CDC34P49427 AC099778.1-201ENST00000568593 1911 ntBASIC16.27■□□□□ 0.19
CDC34P49427 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC16.27■□□□□ 0.19
CDC34P49427 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC16.27■□□□□ 0.19
CDC34P49427 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
CDC34P49427 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC16.27■□□□□ 0.19
CDC34P49427 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
CDC34P49427 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDC34P49427 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC16.26■□□□□ 0.19
CDC34P49427 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC16.26■□□□□ 0.19
CDC34P49427 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDC34P49427 AP006587.3-201ENST00000525742 1516 ntBASIC16.26■□□□□ 0.19
CDC34P49427 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms