Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCP4P48539 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
PCP4P48539 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
PCP4P48539 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PCP4P48539 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
PCP4P48539 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCP4P48539 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.38□□□□□ -0.11
PCP4P48539 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.38□□□□□ -0.11
PCP4P48539 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PCP4P48539 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCP4P48539 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCP4P48539 BID-204ENST00000399767 2129 ntTSL 2 BASIC14.38□□□□□ -0.11
PCP4P48539 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC14.38□□□□□ -0.11
PCP4P48539 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCP4P48539 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
PCP4P48539 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCP4P48539 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PCP4P48539 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCP4P48539 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.37□□□□□ -0.11
PCP4P48539 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCP4P48539 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCP4P48539 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC14.37□□□□□ -0.11
PCP4P48539 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.37□□□□□ -0.11
PCP4P48539 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
PCP4P48539 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCP4P48539 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCP4P48539 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCP4P48539 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC14.37□□□□□ -0.11
PCP4P48539 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PCP4P48539 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCP4P48539 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCP4P48539 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
PCP4P48539 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCP4P48539 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
PCP4P48539 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
PCP4P48539 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
PCP4P48539 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCP4P48539 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCP4P48539 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCP4P48539 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCP4P48539 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCP4P48539 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCP4P48539 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCP4P48539 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PCP4P48539 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCP4P48539 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PCP4P48539 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC14.36□□□□□ -0.11
PCP4P48539 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCP4P48539 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCP4P48539 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
PCP4P48539 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCP4P48539 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
PCP4P48539 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC14.36□□□□□ -0.11
PCP4P48539 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCP4P48539 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCP4P48539 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCP4P48539 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCP4P48539 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCP4P48539 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
PCP4P48539 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCP4P48539 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCP4P48539 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCP4P48539 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC14.36□□□□□ -0.11
PCP4P48539 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCP4P48539 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
PCP4P48539 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
PCP4P48539 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCP4P48539 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCP4P48539 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PCP4P48539 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCP4P48539 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCP4P48539 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCP4P48539 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCP4P48539 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.36□□□□□ -0.11
PCP4P48539 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC14.35□□□□□ -0.11
PCP4P48539 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCP4P48539 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCP4P48539 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCP4P48539 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCP4P48539 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC14.35□□□□□ -0.11
PCP4P48539 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCP4P48539 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.35□□□□□ -0.11
PCP4P48539 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PCP4P48539 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCP4P48539 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC14.35□□□□□ -0.11
PCP4P48539 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCP4P48539 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCP4P48539 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCP4P48539 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
PCP4P48539 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC14.35□□□□□ -0.11
PCP4P48539 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCP4P48539 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC14.35□□□□□ -0.11
PCP4P48539 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC14.35□□□□□ -0.11
PCP4P48539 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCP4P48539 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCP4P48539 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
PCP4P48539 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCP4P48539 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCP4P48539 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC14.35□□□□□ -0.11
PCP4P48539 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms