Protein–RNA interactions for Protein: P48412

UPF3, Nonsense-mediated mRNA decay protein 3, yeastyeast

Known RBP Predictions only

Length 387 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UPF3P48412 VPS74YDR372C 1038 nt2.92□□□□□ -1.94
UPF3P48412 PRE1YER012W 597 nt2.92□□□□□ -1.94
UPF3P48412 SLX9YGR081C 633 nt2.92□□□□□ -1.94
UPF3P48412 YGR228WYGR228W 345 nt2.92□□□□□ -1.94
UPF3P48412 YGR242WYGR242W 309 nt2.92□□□□□ -1.94
UPF3P48412 ACF4YJR083C 930 nt2.92□□□□□ -1.94
UPF3P48412 ESF2YNR054C 951 nt2.92□□□□□ -1.94
UPF3P48412 YOR169CYOR169C 465 nt2.92□□□□□ -1.94
UPF3P48412 SSN2YDR443C 4263 nt2.92□□□□□ -1.94
UPF3P48412 KAP104YBR017C 2757 nt2.92□□□□□ -1.94
UPF3P48412 SLH1YGR271W 5904 nt2.91□□□□□ -1.94
UPF3P48412 CAF120YNL278W 3183 nt2.91□□□□□ -1.94
UPF3P48412 YJR087WYJR087W 351 nt2.91□□□□□ -1.94
UPF3P48412 SDH3YKL141W 597 nt2.91□□□□□ -1.94
UPF3P48412 GMC2YLR445W 567 nt2.91□□□□□ -1.94
UPF3P48412 RPL19BYBL027W 570 nt2.91□□□□□ -1.94
UPF3P48412 YNR034W-AYNR034W-A 297 nt2.91□□□□□ -1.94
UPF3P48412 DRS2YAL026C 4068 nt2.91□□□□□ -1.94
UPF3P48412 GAL80YML051W 1308 nt2.91□□□□□ -1.94
UPF3P48412 FIR1YER032W 2631 nt2.9□□□□□ -1.94
UPF3P48412 RGC1YPR115W 3252 nt2.9□□□□□ -1.94
UPF3P48412 ATG26YLR189C 3597 nt2.9□□□□□ -1.94
UPF3P48412 OCA6YDR067C 675 nt2.9□□□□□ -1.95
UPF3P48412 NCB2YDR397C 441 nt2.9□□□□□ -1.95
UPF3P48412 YDR537CYDR537C 606 nt2.9□□□□□ -1.95
UPF3P48412 AST2YER101C 1293 nt2.9□□□□□ -1.95
UPF3P48412 TAO3YIL129C 7131 nt2.9□□□□□ -1.95
UPF3P48412 PRP8YHR165C 7242 nt2.9□□□□□ -1.95
UPF3P48412 DAL5YJR152W 1632 nt2.9□□□□□ -1.95
UPF3P48412 IKI3YLR384C 4050 nt2.89□□□□□ -1.95
UPF3P48412 DNL4YOR005C 2835 nt2.89□□□□□ -1.95
UPF3P48412 PMR1YGL167C 2853 nt2.89□□□□□ -1.95
UPF3P48412 SEC7YDR170C 6030 nt2.89□□□□□ -1.95
UPF3P48412 snR76snR76 109 nt2.89□□□□□ -1.95
UPF3P48412 MRH1YDR033W 963 nt2.89□□□□□ -1.95
UPF3P48412 FIN1YDR130C 876 nt2.89□□□□□ -1.95
UPF3P48412 YIP5YGL161C 933 nt2.89□□□□□ -1.95
UPF3P48412 YJL119CYJL119C 324 nt2.89□□□□□ -1.95
UPF3P48412 YAL026C-AYAL026C-A 438 nt2.89□□□□□ -1.95
UPF3P48412 PHD1YKL043W 1101 nt2.89□□□□□ -1.95
UPF3P48412 YLR230WYLR230W 306 nt2.89□□□□□ -1.95
UPF3P48412 TAP42YMR028W 1101 nt2.89□□□□□ -1.95
UPF3P48412 YOL150CYOL150C 312 nt2.89□□□□□ -1.95
UPF3P48412 PEP12YOR036W 867 nt2.89□□□□□ -1.95
UPF3P48412 RRI2YOL117W 1938 nt2.89□□□□□ -1.95
UPF3P48412 ECM29YHL030W 5607 nt2.88□□□□□ -1.95
UPF3P48412 GCD10YNL062C 1437 nt2.88□□□□□ -1.95
UPF3P48412 YGR107WYGR107W 450 nt2.88□□□□□ -1.95
UPF3P48412 RPL6AYML073C 531 nt2.88□□□□□ -1.95
UPF3P48412 RIM9YMR063W 720 nt2.88□□□□□ -1.95
UPF3P48412 YMR144WYMR144W 1029 nt2.88□□□□□ -1.95
UPF3P48412 YMR187CYMR187C 1296 nt2.88□□□□□ -1.95
UPF3P48412 PUF4YGL014W 2667 nt2.88□□□□□ -1.95
UPF3P48412 LEU3YLR451W 2661 nt2.87□□□□□ -1.95
UPF3P48412 NMD2YHR077C 3270 nt2.87□□□□□ -1.95
UPF3P48412 RPS17BYDR447C 411 nt2.87□□□□□ -1.95
UPF3P48412 YHL005CYHL005C 393 nt2.87□□□□□ -1.95
UPF3P48412 CSE4YKL049C 690 nt2.87□□□□□ -1.95
UPF3P48412 UBP14YBR058C 2346 nt2.87□□□□□ -1.95
UPF3P48412 HEH2YDR458C 1992 nt2.87□□□□□ -1.95
UPF3P48412 ERG11YHR007C 1593 nt2.87□□□□□ -1.95
UPF3P48412 AFR1YDR085C 1863 nt2.86□□□□□ -1.95
UPF3P48412 RTS3YGR161C 792 nt2.86□□□□□ -1.95
UPF3P48412 NOP19YGR251W 591 nt2.86□□□□□ -1.95
UPF3P48412 APC9YLR102C 798 nt2.86□□□□□ -1.95
UPF3P48412 YOR364WYOR364W 369 nt2.86□□□□□ -1.95
UPF3P48412 ISU1YPL135W 498 nt2.86□□□□□ -1.95
UPF3P48412 YPR153WYPR153W 423 nt2.86□□□□□ -1.95
UPF3P48412 YIL166CYIL166C 1629 nt2.86□□□□□ -1.95
UPF3P48412 YLR001CYLR001C 2589 nt2.85□□□□□ -1.95
UPF3P48412 IRC2YDR112W 309 nt2.85□□□□□ -1.95
UPF3P48412 MRM2YGL136C 963 nt2.85□□□□□ -1.95
UPF3P48412 HRI1YLR301W 735 nt2.85□□□□□ -1.95
UPF3P48412 GPI17YDR434W 1605 nt2.84□□□□□ -1.95
UPF3P48412 UTP14YML093W 2700 nt2.84□□□□□ -1.95
UPF3P48412 ADK1YDR226W 669 nt2.84□□□□□ -1.95
UPF3P48412 CHZ1YER030W 462 nt2.84□□□□□ -1.95
UPF3P48412 YHL006W-AYHL006W-A 354 nt2.84□□□□□ -1.95
UPF3P48412 YLR297WYLR297W 390 nt2.84□□□□□ -1.95
UPF3P48412 YMR316C-AYMR316C-A 312 nt2.84□□□□□ -1.95
UPF3P48412 YNL046WYNL046W 519 nt2.84□□□□□ -1.95
UPF3P48412 COQ10YOL008W 624 nt2.84□□□□□ -1.95
UPF3P48412 CRS5YOR031W 210 nt2.84□□□□□ -1.95
UPF3P48412 YBT1YLL048C 4986 nt2.84□□□□□ -1.95
UPF3P48412 ROG1YGL144C 2058 nt2.84□□□□□ -1.95
UPF3P48412 TPS2YDR074W 2691 nt2.84□□□□□ -1.96
UPF3P48412 YDL009CYDL009C 324 nt2.83□□□□□ -1.96
UPF3P48412 PPH3YDR075W 927 nt2.83□□□□□ -1.96
UPF3P48412 tC(GCA)BtC(GCA)B 72 nt2.83□□□□□ -1.96
UPF3P48412 tC(GCA)GtC(GCA)G 72 nt2.83□□□□□ -1.96
UPF3P48412 tC(GCA)P1tC(GCA)P1 72 nt2.83□□□□□ -1.96
UPF3P48412 tC(GCA)P2tC(GCA)P2 72 nt2.83□□□□□ -1.96
UPF3P48412 TIF35YDR429C 825 nt2.83□□□□□ -1.96
UPF3P48412 PEA2YER149C 1263 nt2.83□□□□□ -1.96
UPF3P48412 EMC4YGL231C 573 nt2.83□□□□□ -1.96
UPF3P48412 YLR271WYLR271W 825 nt2.83□□□□□ -1.96
UPF3P48412 GDI1YER136W 1356 nt2.83□□□□□ -1.96
UPF3P48412 MDM1YML104C 3384 nt2.83□□□□□ -1.96
UPF3P48412 SCEIQ0160 708 nt2.82□□□□□ -1.96
UPF3P48412 DFG10YIL049W 762 nt2.82□□□□□ -1.96
Retrieved 100 of 7,029 protein–RNA pairs in 20.3 ms