Protein–RNA interactions for Protein: P43588

RPN11, Ubiquitin carboxyl-terminal hydrolase RPN11, yeastyeast

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN11P43588 YOR050CYOR050C 348 nt3.15□□□□□ -1.91
RPN11P43588 MRPL40YPL173W 894 nt3.15□□□□□ -1.91
RPN11P43588 YPR077CYPR077C 372 nt3.15□□□□□ -1.91
RPN11P43588 PEX1YKL197C 3132 nt3.15□□□□□ -1.91
RPN11P43588 ETP1YHL010C 1758 nt3.15□□□□□ -1.91
RPN11P43588 UTP15YMR093W 1542 nt3.14□□□□□ -1.91
RPN11P43588 PUT3YKL015W 2940 nt3.14□□□□□ -1.91
RPN11P43588 MET5YJR137C 4329 nt3.14□□□□□ -1.91
RPN11P43588 ITC1YGL133W 3795 nt3.14□□□□□ -1.91
RPN11P43588 PET54YGR222W 882 nt3.14□□□□□ -1.91
RPN11P43588 ANS1YHR126C 480 nt3.14□□□□□ -1.91
RPN11P43588 ACF4YJR083C 930 nt3.14□□□□□ -1.91
RPN11P43588 YLR224WYLR224W 1110 nt3.14□□□□□ -1.91
RPN11P43588 YLR379WYLR379W 375 nt3.14□□□□□ -1.91
RPN11P43588 TVP18YMR071C 504 nt3.14□□□□□ -1.91
RPN11P43588 RSM19YNR037C 276 nt3.14□□□□□ -1.91
RPN11P43588 YOL159C-AYOL159C-A 273 nt3.14□□□□□ -1.91
RPN11P43588 HAA1YPR008W 2085 nt3.14□□□□□ -1.91
RPN11P43588 SKO1YNL167C 1944 nt3.14□□□□□ -1.91
RPN11P43588 YSP2YDR326C 4317 nt3.14□□□□□ -1.91
RPN11P43588 VIP1YLR410W 3441 nt3.13□□□□□ -1.91
RPN11P43588 snR59snR59 78 nt3.13□□□□□ -1.91
RPN11P43588 YEL030C-AYEL030C-A 315 nt3.13□□□□□ -1.91
RPN11P43588 RRT13YER066W 558 nt3.13□□□□□ -1.91
RPN11P43588 ATP7YKL016C 525 nt3.13□□□□□ -1.91
RPN11P43588 YNL122CYNL122C 348 nt3.13□□□□□ -1.91
RPN11P43588 SNU56YDR240C 1479 nt3.13□□□□□ -1.91
RPN11P43588 PRP22YER013W 3438 nt3.13□□□□□ -1.91
RPN11P43588 MMS1YPR164W 4224 nt3.13□□□□□ -1.91
RPN11P43588 MAK5YBR142W 2322 nt3.13□□□□□ -1.91
RPN11P43588 NSP1YJL041W 2472 nt3.12□□□□□ -1.91
RPN11P43588 PCK1YKR097W 1650 nt3.12□□□□□ -1.91
RPN11P43588 PHR1YOR386W 1698 nt3.12□□□□□ -1.91
RPN11P43588 YIL068W-AYIL068W-A 384 nt3.12□□□□□ -1.91
RPN11P43588 EAF6YJR082C 342 nt3.12□□□□□ -1.91
RPN11P43588 CSE4YKL049C 690 nt3.12□□□□□ -1.91
RPN11P43588 RRT1YBL048W 312 nt3.12□□□□□ -1.91
RPN11P43588 MRPL44YMR225C 297 nt3.12□□□□□ -1.91
RPN11P43588 YNR034W-AYNR034W-A 297 nt3.12□□□□□ -1.91
RPN11P43588 SLH1YGR271W 5904 nt3.12□□□□□ -1.91
RPN11P43588 YCG1YDR325W 3108 nt3.11□□□□□ -1.91
RPN11P43588 KAR9YPL269W 1935 nt3.11□□□□□ -1.91
RPN11P43588 YCR001WYCR001W 315 nt3.11□□□□□ -1.91
RPN11P43588 EMI1YDR512C 564 nt3.11□□□□□ -1.91
RPN11P43588 MXR1YER042W 555 nt3.11□□□□□ -1.91
RPN11P43588 YJL169WYJL169W 369 nt3.11□□□□□ -1.91
RPN11P43588 PFY1YOR122C 381 nt3.11□□□□□ -1.91
RPN11P43588 PIS1YPR113W 663 nt3.11□□□□□ -1.91
RPN11P43588 YOR343W-AYOR343W-A 1317 nt3.11□□□□□ -1.91
RPN11P43588 VBA4YDR119W 2307 nt3.1□□□□□ -1.91
RPN11P43588 HOP1YIL072W 1818 nt3.1□□□□□ -1.91
RPN11P43588 ICR1ICR1 3199 nt3.1□□□□□ -1.91
RPN11P43588 YLR076CYLR076C 423 nt3.1□□□□□ -1.91
RPN11P43588 PEX11YOL147C 711 nt3.1□□□□□ -1.91
RPN11P43588 NAB3YPL190C 2409 nt3.1□□□□□ -1.91
RPN11P43588 MAL33YBR297W 1407 nt3.1□□□□□ -1.91
RPN11P43588 BMS1YPL217C 3552 nt3.1□□□□□ -1.91
RPN11P43588 RRI2YOL117W 1938 nt3.09□□□□□ -1.91
RPN11P43588 SCY1YGL083W 2415 nt3.09□□□□□ -1.91
RPN11P43588 YDR338CYDR338C 2088 nt3.09□□□□□ -1.91
RPN11P43588 YNL193WYNL193W 1677 nt3.09□□□□□ -1.91
RPN11P43588 YER091C-AYER091C-A 222 nt3.09□□□□□ -1.91
RPN11P43588 SPT4YGR063C 309 nt3.09□□□□□ -1.91
RPN11P43588 HHF2YNL030W 312 nt3.09□□□□□ -1.91
RPN11P43588 YNL203CYNL203C 612 nt3.09□□□□□ -1.91
RPN11P43588 SAP1YER047C 2694 nt3.09□□□□□ -1.91
RPN11P43588 YEL1YBL060W 2064 nt3.08□□□□□ -1.92
RPN11P43588 YBL005W-BYBL005W-B 5268 nt3.08□□□□□ -1.92
RPN11P43588 CBP2YHL038C 1893 nt3.08□□□□□ -1.92
RPN11P43588 YCR090CYCR090C 549 nt3.08□□□□□ -1.92
RPN11P43588 VPS74YDR372C 1038 nt3.08□□□□□ -1.92
RPN11P43588 YDR431WYDR431W 312 nt3.08□□□□□ -1.92
RPN11P43588 YDR464C-AYDR464C-A 189 nt3.08□□□□□ -1.92
RPN11P43588 ADI1YMR009W 540 nt3.08□□□□□ -1.92
RPN11P43588 RPS7AYOR096W 573 nt3.08□□□□□ -1.92
RPN11P43588 SRB4YER022W 2064 nt3.08□□□□□ -1.92
RPN11P43588 SMC2YFR031C 3513 nt3.08□□□□□ -1.92
RPN11P43588 SWC4YGR002C 1431 nt3.08□□□□□ -1.92
RPN11P43588 PDR1YGL013C 3207 nt3.08□□□□□ -1.92
RPN11P43588 DAL5YJR152W 1632 nt3.08□□□□□ -1.92
RPN11P43588 YDL242WYDL242W 354 nt3.07□□□□□ -1.92
RPN11P43588 RMT2YDR465C 1239 nt3.07□□□□□ -1.92
RPN11P43588 VMA8YEL051W 771 nt3.07□□□□□ -1.92
RPN11P43588 YFL019CYFL019C 354 nt3.07□□□□□ -1.92
RPN11P43588 YGR045CYGR045C 363 nt3.07□□□□□ -1.92
RPN11P43588 YIR020CYIR020C 303 nt3.07□□□□□ -1.92
RPN11P43588 YMR144WYMR144W 1029 nt3.07□□□□□ -1.92
RPN11P43588 RHO5YNL180C 996 nt3.07□□□□□ -1.92
RPN11P43588 RGL1YPL066W 1440 nt3.07□□□□□ -1.92
RPN11P43588 GYL1YMR192W 2163 nt3.07□□□□□ -1.92
RPN11P43588 SHE4YOR035C 2370 nt3.07□□□□□ -1.92
RPN11P43588 AHC2YCR082W 387 nt3.06□□□□□ -1.92
RPN11P43588 YDR442WYDR442W 393 nt3.06□□□□□ -1.92
RPN11P43588 RPS24AYER074W 408 nt3.06□□□□□ -1.92
RPN11P43588 YGL159WYGL159W 1113 nt3.06□□□□□ -1.92
RPN11P43588 CPR7YJR032W 1182 nt3.06□□□□□ -1.92
RPN11P43588 BER1YLR412W 825 nt3.06□□□□□ -1.92
RPN11P43588 OST6YML019W 999 nt3.06□□□□□ -1.92
RPN11P43588 RPL16BYNL069C 597 nt3.06□□□□□ -1.92
RPN11P43588 DBF20YPR111W 1695 nt3.06□□□□□ -1.92
Retrieved 100 of 7,029 protein–RNA pairs in 162.4 ms