Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCNFP41002 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCNFP41002 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CCNFP41002 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CCNFP41002 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CCNFP41002 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCNFP41002 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.91
CCNFP41002 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCNFP41002 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CCNFP41002 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCNFP41002 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.76■□□□□ 0.91
CCNFP41002 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCNFP41002 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
CCNFP41002 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.76■□□□□ 0.91
CCNFP41002 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCNFP41002 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
CCNFP41002 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.76■□□□□ 0.91
CCNFP41002 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCNFP41002 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.76■□□□□ 0.91
CCNFP41002 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCNFP41002 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.76■□□□□ 0.91
CCNFP41002 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CCNFP41002 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCNFP41002 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.76■□□□□ 0.91
CCNFP41002 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCNFP41002 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.75■□□□□ 0.91
CCNFP41002 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCNFP41002 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.75■□□□□ 0.91
CCNFP41002 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCNFP41002 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCNFP41002 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.75■□□□□ 0.91
CCNFP41002 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.75■□□□□ 0.91
CCNFP41002 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCNFP41002 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCNFP41002 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CCNFP41002 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.75■□□□□ 0.91
CCNFP41002 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.75■□□□□ 0.91
CCNFP41002 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.75■□□□□ 0.91
CCNFP41002 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.75■□□□□ 0.91
CCNFP41002 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
CCNFP41002 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.75■□□□□ 0.91
CCNFP41002 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCNFP41002 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.75■□□□□ 0.91
CCNFP41002 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.75■□□□□ 0.91
CCNFP41002 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.75■□□□□ 0.91
CCNFP41002 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCNFP41002 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CCNFP41002 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCNFP41002 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.74■□□□□ 0.91
CCNFP41002 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCNFP41002 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCNFP41002 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CCNFP41002 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCNFP41002 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.74■□□□□ 0.91
CCNFP41002 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CCNFP41002 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.74■□□□□ 0.91
CCNFP41002 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.74■□□□□ 0.91
CCNFP41002 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCNFP41002 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.74■□□□□ 0.91
CCNFP41002 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCNFP41002 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.74■□□□□ 0.91
CCNFP41002 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCNFP41002 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.74■□□□□ 0.91
CCNFP41002 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCNFP41002 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCNFP41002 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.73■□□□□ 0.91
CCNFP41002 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CCNFP41002 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.73■□□□□ 0.91
CCNFP41002 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCNFP41002 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CCNFP41002 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CCNFP41002 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCNFP41002 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCNFP41002 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.73■□□□□ 0.91
CCNFP41002 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCNFP41002 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.73■□□□□ 0.91
CCNFP41002 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.73■□□□□ 0.91
CCNFP41002 TERF1P2-201ENST00000583350 1212 ntBASIC20.73■□□□□ 0.91
CCNFP41002 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCNFP41002 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CCNFP41002 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCNFP41002 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.73■□□□□ 0.91
CCNFP41002 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CCNFP41002 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CCNFP41002 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.73■□□□□ 0.91
CCNFP41002 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCNFP41002 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCNFP41002 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CCNFP41002 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCNFP41002 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CCNFP41002 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.72■□□□□ 0.91
CCNFP41002 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.72■□□□□ 0.91
CCNFP41002 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCNFP41002 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCNFP41002 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCNFP41002 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CCNFP41002 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCNFP41002 AC097381.1-201ENST00000429019 1296 ntBASIC20.72■□□□□ 0.91
CCNFP41002 AC079140.4-201ENST00000507448 529 ntBASIC20.72■□□□□ 0.91
CCNFP41002 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms