Protein–RNA interactions for Protein: P40965

MSH4, MutS protein homolog 4, yeastyeast

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH4P40965 ELM1YKL048C 1923 nt4.27□□□□□ -1.73
MSH4P40965 ARF1YDL192W 546 nt4.27□□□□□ -1.73
MSH4P40965 MIC19YFR011C 513 nt4.27□□□□□ -1.73
MSH4P40965 TCD1YHR003C 1290 nt4.27□□□□□ -1.73
MSH4P40965 RPL6BYLR448W 531 nt4.27□□□□□ -1.73
MSH4P40965 ATX1YNL259C 222 nt4.27□□□□□ -1.73
MSH4P40965 STP2YHR006W 1626 nt4.27□□□□□ -1.73
MSH4P40965 MDM36YPR083W 1740 nt4.26□□□□□ -1.73
MSH4P40965 SCY1YGL083W 2415 nt4.26□□□□□ -1.73
MSH4P40965 SPT6YGR116W 4356 nt4.26□□□□□ -1.73
MSH4P40965 YDL009CYDL009C 324 nt4.26□□□□□ -1.73
MSH4P40965 OPI6YDL096C 327 nt4.26□□□□□ -1.73
MSH4P40965 FRQ1YDR373W 573 nt4.26□□□□□ -1.73
MSH4P40965 SMX2YFL017W-A 234 nt4.26□□□□□ -1.73
MSH4P40965 YGR053CYGR053C 852 nt4.26□□□□□ -1.73
MSH4P40965 LAG1YHL003C 1236 nt4.26□□□□□ -1.73
MSH4P40965 TEN1YLR010C 483 nt4.26□□□□□ -1.73
MSH4P40965 YPL276WYPL276W 438 nt4.26□□□□□ -1.73
MSH4P40965 VAC8YEL013W 1737 nt4.26□□□□□ -1.73
MSH4P40965 JEN1YKL217W 1851 nt4.26□□□□□ -1.73
MSH4P40965 STI1YOR027W 1770 nt4.25□□□□□ -1.73
MSH4P40965 IRC3YDR332W 2070 nt4.25□□□□□ -1.73
MSH4P40965 LCB5YLR260W 2064 nt4.25□□□□□ -1.73
MSH4P40965 REC104YHR157W 549 nt4.25□□□□□ -1.73
MSH4P40965 GTT2YLL060C 702 nt4.25□□□□□ -1.73
MSH4P40965 YNL146C-AYNL146C-A 195 nt4.25□□□□□ -1.73
MSH4P40965 ERP4YOR016C 624 nt4.25□□□□□ -1.73
MSH4P40965 HEF3YNL014W 3135 nt4.25□□□□□ -1.73
MSH4P40965 FAT1YBR041W 2010 nt4.24□□□□□ -1.73
MSH4P40965 YDR194W-AYDR194W-A 153 nt4.24□□□□□ -1.73
MSH4P40965 YDR464C-AYDR464C-A 189 nt4.24□□□□□ -1.73
MSH4P40965 YFL032WYFL032W 321 nt4.24□□□□□ -1.73
MSH4P40965 RPL11BYGR085C 525 nt4.24□□□□□ -1.73
MSH4P40965 PAU13YHL046C 363 nt4.24□□□□□ -1.73
MSH4P40965 YHR007C-AYHR007C-A 216 nt4.24□□□□□ -1.73
MSH4P40965 YJL197C-AYJL197C-A 282 nt4.24□□□□□ -1.73
MSH4P40965 ILV5YLR355C 1188 nt4.24□□□□□ -1.73
MSH4P40965 INO4YOL108C 456 nt4.24□□□□□ -1.73
MSH4P40965 ZEO1YOL109W 342 nt4.24□□□□□ -1.73
MSH4P40965 RPL11AYPR102C 525 nt4.24□□□□□ -1.73
MSH4P40965 BRE5YNR051C 1548 nt4.24□□□□□ -1.73
MSH4P40965 RPO21YDL140C 5202 nt4.23□□□□□ -1.73
MSH4P40965 SRD1YCR018C 666 nt4.23□□□□□ -1.73
MSH4P40965 PHM6YDR281C 315 nt4.23□□□□□ -1.73
MSH4P40965 YER107W-AYER107W-A 321 nt4.23□□□□□ -1.73
MSH4P40965 SPT4YGR063C 309 nt4.23□□□□□ -1.73
MSH4P40965 YMR316C-AYMR316C-A 312 nt4.23□□□□□ -1.73
MSH4P40965 RRD2YPL152W 1077 nt4.23□□□□□ -1.73
MSH4P40965 RDS1YCR106W 2499 nt4.23□□□□□ -1.73
MSH4P40965 DSF2YBR007C 2211 nt4.23□□□□□ -1.73
MSH4P40965 YJL132WYJL132W 2253 nt4.22□□□□□ -1.73
MSH4P40965 RAD14YMR201C 1116 nt4.22□□□□□ -1.73
MSH4P40965 MRPL50YNR022C 420 nt4.22□□□□□ -1.73
MSH4P40965 YOL114CYOL114C 609 nt4.22□□□□□ -1.73
MSH4P40965 NSP1YJL041W 2472 nt4.22□□□□□ -1.73
MSH4P40965 BEM4YPL161C 1902 nt4.22□□□□□ -1.73
MSH4P40965 YJR030CYJR030C 2238 nt4.22□□□□□ -1.73
MSH4P40965 BAR1YIL015W 1764 nt4.22□□□□□ -1.73
MSH4P40965 ARG5,6YER069W 2592 nt4.21□□□□□ -1.73
MSH4P40965 RSF2YJR127C 4143 nt4.21□□□□□ -1.74
MSH4P40965 YDL068WYDL068W 330 nt4.21□□□□□ -1.74
MSH4P40965 YDR102CYDR102C 333 nt4.21□□□□□ -1.74
MSH4P40965 FMP32YFL046W 624 nt4.21□□□□□ -1.74
MSH4P40965 YGR107WYGR107W 450 nt4.21□□□□□ -1.74
MSH4P40965 RPL39YJL189W 156 nt4.21□□□□□ -1.74
MSH4P40965 YAL031W-AYAL031W-A 309 nt4.21□□□□□ -1.74
MSH4P40965 UBC7YMR022W 498 nt4.21□□□□□ -1.74
MSH4P40965 YJR003CYJR003C 1560 nt4.21□□□□□ -1.74
MSH4P40965 DBF20YPR111W 1695 nt4.21□□□□□ -1.74
MSH4P40965 ROY1YMR258C 1662 nt4.2□□□□□ -1.74
MSH4P40965 YRR1YOR162C 2433 nt4.2□□□□□ -1.74
MSH4P40965 YEL032C-AYEL032C-A 162 nt4.2□□□□□ -1.74
MSH4P40965 YER038W-AYER038W-A 381 nt4.2□□□□□ -1.74
MSH4P40965 RPL1BYGL135W 654 nt4.2□□□□□ -1.74
MSH4P40965 YIL141WYIL141W 390 nt4.2□□□□□ -1.74
MSH4P40965 RPL1AYPL220W 654 nt4.2□□□□□ -1.74
MSH4P40965 STE5YDR103W 2754 nt4.2□□□□□ -1.74
MSH4P40965 OSH6YKR003W 1347 nt4.2□□□□□ -1.74
MSH4P40965 ARG2YJL071W 1725 nt4.19□□□□□ -1.74
MSH4P40965 APE2YKL157W 2859 nt4.19□□□□□ -1.74
MSH4P40965 SOD1YJR104C 465 nt4.19□□□□□ -1.74
MSH4P40965 TMA19YKL056C 504 nt4.19□□□□□ -1.74
MSH4P40965 YLR416CYLR416C 399 nt4.19□□□□□ -1.74
MSH4P40965 HHF1YBR009C 312 nt4.19□□□□□ -1.74
MSH4P40965 YOR192C-CYOR192C-C 237 nt4.19□□□□□ -1.74
MSH4P40965 CDC45YLR103C 1953 nt4.19□□□□□ -1.74
MSH4P40965 UTP15YMR093W 1542 nt4.19□□□□□ -1.74
MSH4P40965 SPT16YGL207W 3108 nt4.18□□□□□ -1.74
MSH4P40965 SMT3YDR510W 306 nt4.18□□□□□ -1.74
MSH4P40965 YPS5YGL259W 498 nt4.18□□□□□ -1.74
MSH4P40965 BLI1YKL061W 342 nt4.18□□□□□ -1.74
MSH4P40965 HHT2YNL031C 411 nt4.18□□□□□ -1.74
MSH4P40965 IMP4YNL075W 873 nt4.18□□□□□ -1.74
MSH4P40965 LTP1YPR073C 486 nt4.18□□□□□ -1.74
MSH4P40965 RIM13YMR154C 2184 nt4.18□□□□□ -1.74
MSH4P40965 TOP1YOL006C 2310 nt4.18□□□□□ -1.74
MSH4P40965 SRP68YPL243W 1800 nt4.18□□□□□ -1.74
MSH4P40965 PHO81YGR233C 3537 nt4.18□□□□□ -1.74
MSH4P40965 SYT1YPR095C 3681 nt4.17□□□□□ -1.74
MSH4P40965 YGL165CYGL165C 579 nt4.17□□□□□ -1.74
Retrieved 100 of 7,029 protein–RNA pairs in 47.1 ms