Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 DUX4L1-201ENST00000627662 1275 ntBASIC19.61■□□□□ 0.73
RPL3P39023 DUX4L8-201ENST00000629013 1275 ntBASIC19.61■□□□□ 0.73
RPL3P39023 DUX4L3-201ENST00000630187 1275 ntBASIC19.61■□□□□ 0.73
RPL3P39023 DUX4L7-201ENST00000630678 1275 ntBASIC19.61■□□□□ 0.73
RPL3P39023 DUX4L5-201ENST00000630834 1275 ntBASIC19.61■□□□□ 0.73
RPL3P39023 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPL3P39023 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPL3P39023 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RPL3P39023 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.61■□□□□ 0.73
RPL3P39023 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPL3P39023 LINC01006-201ENST00000333319 2292 ntBASIC19.6■□□□□ 0.73
RPL3P39023 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPL3P39023 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
RPL3P39023 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
RPL3P39023 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
RPL3P39023 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RPL3P39023 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.6■□□□□ 0.73
RPL3P39023 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.6■□□□□ 0.73
RPL3P39023 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.6■□□□□ 0.73
RPL3P39023 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.6■□□□□ 0.73
RPL3P39023 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.6■□□□□ 0.73
RPL3P39023 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RPL3P39023 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPL3P39023 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPL3P39023 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RPL3P39023 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RPL3P39023 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.6■□□□□ 0.73
RPL3P39023 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.59■□□□□ 0.73
RPL3P39023 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.59■□□□□ 0.73
RPL3P39023 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPL3P39023 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.59■□□□□ 0.73
RPL3P39023 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RPL3P39023 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.59■□□□□ 0.73
RPL3P39023 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPL3P39023 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPL3P39023 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RPL3P39023 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPL3P39023 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPL3P39023 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RPL3P39023 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.59■□□□□ 0.73
RPL3P39023 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RPL3P39023 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPL3P39023 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.59■□□□□ 0.73
RPL3P39023 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPL3P39023 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPL3P39023 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPL3P39023 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPL3P39023 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPL3P39023 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.58■□□□□ 0.72
RPL3P39023 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RPL3P39023 KRT18P20-201ENST00000548986 1279 ntBASIC19.58■□□□□ 0.72
RPL3P39023 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.58■□□□□ 0.72
RPL3P39023 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.58■□□□□ 0.72
RPL3P39023 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.72
RPL3P39023 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RPL3P39023 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.58■□□□□ 0.72
RPL3P39023 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.58■□□□□ 0.72
RPL3P39023 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.57■□□□□ 0.72
RPL3P39023 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RPL3P39023 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.57■□□□□ 0.72
RPL3P39023 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.57■□□□□ 0.72
RPL3P39023 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
RPL3P39023 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPL3P39023 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPL3P39023 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPL3P39023 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPL3P39023 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
RPL3P39023 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RPL3P39023 YBX1P1-201ENST00000445822 960 ntBASIC19.57■□□□□ 0.72
RPL3P39023 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.57■□□□□ 0.72
RPL3P39023 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.57■□□□□ 0.72
RPL3P39023 RARRES2P11-201ENST00000635158 484 ntBASIC19.57■□□□□ 0.72
RPL3P39023 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPL3P39023 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPL3P39023 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.57■□□□□ 0.72
RPL3P39023 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RPL3P39023 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RPL3P39023 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.57■□□□□ 0.72
RPL3P39023 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RPL3P39023 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPL3P39023 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPL3P39023 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPL3P39023 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPL3P39023 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPL3P39023 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RPL3P39023 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.56■□□□□ 0.72
RPL3P39023 CCDC92B-201ENST00000575506 885 ntBASIC19.56■□□□□ 0.72
RPL3P39023 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPL3P39023 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RPL3P39023 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPL3P39023 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPL3P39023 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.56■□□□□ 0.72
RPL3P39023 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
RPL3P39023 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.56■□□□□ 0.72
RPL3P39023 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RPL3P39023 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPL3P39023 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPL3P39023 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RPL3P39023 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPL3P39023 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms