Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC15.19■□□□□ 0.02
CKS2P33552 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CKS2P33552 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CKS2P33552 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
CKS2P33552 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CKS2P33552 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CKS2P33552 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC15.19■□□□□ 0.02
CKS2P33552 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
CKS2P33552 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC15.19■□□□□ 0.02
CKS2P33552 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CKS2P33552 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CKS2P33552 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CKS2P33552 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC15.19■□□□□ 0.02
CKS2P33552 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC15.19■□□□□ 0.02
CKS2P33552 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CKS2P33552 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC15.19■□□□□ 0.02
CKS2P33552 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC15.19■□□□□ 0.02
CKS2P33552 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CKS2P33552 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CKS2P33552 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CKS2P33552 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC15.19■□□□□ 0.02
CKS2P33552 AC068587.7-201ENST00000641602 218 ntBASIC15.19■□□□□ 0.02
CKS2P33552 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC15.19■□□□□ 0.02
CKS2P33552 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CKS2P33552 AC121338.2-201ENST00000622535 1744 ntBASIC15.19■□□□□ 0.02
CKS2P33552 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CKS2P33552 SMG8-203ENST00000578922 2178 ntBASIC15.19■□□□□ 0.02
CKS2P33552 AC120498.9-201ENST00000339021 3867 ntBASIC15.19■□□□□ 0.02
CKS2P33552 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
CKS2P33552 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CKS2P33552 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CKS2P33552 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
CKS2P33552 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CKS2P33552 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC15.19■□□□□ 0.02
CKS2P33552 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CKS2P33552 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CKS2P33552 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
CKS2P33552 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CKS2P33552 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC15.18■□□□□ 0.02
CKS2P33552 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CKS2P33552 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CKS2P33552 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CKS2P33552 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CKS2P33552 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC15.18■□□□□ 0.02
CKS2P33552 AC007225.1-201ENST00000566331 1836 ntBASIC15.18■□□□□ 0.02
CKS2P33552 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
CKS2P33552 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CKS2P33552 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC15.18■□□□□ 0.02
CKS2P33552 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CKS2P33552 CLTA-206ENST00000466396 695 ntTSL 2 BASIC15.18■□□□□ 0.02
CKS2P33552 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC15.18■□□□□ 0.02
CKS2P33552 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC15.18■□□□□ 0.02
CKS2P33552 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC15.18■□□□□ 0.02
CKS2P33552 AC087239.1-201ENST00000622671 572 ntBASIC15.18■□□□□ 0.02
CKS2P33552 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CKS2P33552 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CKS2P33552 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
CKS2P33552 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CKS2P33552 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CKS2P33552 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CKS2P33552 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CKS2P33552 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CKS2P33552 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
CKS2P33552 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CKS2P33552 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CKS2P33552 USP39-204ENST00000409766 2033 ntTSL 2 BASIC15.17■□□□□ 0.02
CKS2P33552 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
CKS2P33552 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CKS2P33552 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CKS2P33552 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CKS2P33552 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CKS2P33552 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CKS2P33552 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CKS2P33552 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC15.17■□□□□ 0.02
CKS2P33552 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CKS2P33552 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC15.17■□□□□ 0.02
CKS2P33552 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CKS2P33552 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
CKS2P33552 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC15.17■□□□□ 0.02
CKS2P33552 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CKS2P33552 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CKS2P33552 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
CKS2P33552 MBP-237ENST00000579129 1052 ntTSL 5 BASIC15.17■□□□□ 0.02
CKS2P33552 MIR4508-201ENST00000584178 70 ntBASIC15.17■□□□□ 0.02
CKS2P33552 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CKS2P33552 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CKS2P33552 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CKS2P33552 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CKS2P33552 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC15.17■□□□□ 0.02
CKS2P33552 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CKS2P33552 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CKS2P33552 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CKS2P33552 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CKS2P33552 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CKS2P33552 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CKS2P33552 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC15.17■□□□□ 0.02
CKS2P33552 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CKS2P33552 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC15.16■□□□□ 0.02
CKS2P33552 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
CKS2P33552 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms