Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
ABCD3P28288 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.07■□□□□ 0.64
ABCD3P28288 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ABCD3P28288 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ABCD3P28288 CYP2T1P-201ENST00000432607 1285 ntBASIC19.07■□□□□ 0.64
ABCD3P28288 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ABCD3P28288 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.07■□□□□ 0.64
ABCD3P28288 CDV3P1-201ENST00000471403 739 ntBASIC19.07■□□□□ 0.64
ABCD3P28288 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ABCD3P28288 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ABCD3P28288 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.07■□□□□ 0.64
ABCD3P28288 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ABCD3P28288 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
ABCD3P28288 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ABCD3P28288 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ABCD3P28288 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ABCD3P28288 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
ABCD3P28288 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.06■□□□□ 0.64
ABCD3P28288 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
ABCD3P28288 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.06■□□□□ 0.64
ABCD3P28288 AC006970.2-201ENST00000450065 779 ntBASIC19.06■□□□□ 0.64
ABCD3P28288 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
ABCD3P28288 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.06■□□□□ 0.64
ABCD3P28288 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.06■□□□□ 0.64
ABCD3P28288 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
ABCD3P28288 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
ABCD3P28288 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.06■□□□□ 0.64
ABCD3P28288 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ABCD3P28288 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.05■□□□□ 0.64
ABCD3P28288 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ABCD3P28288 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ABCD3P28288 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ABCD3P28288 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.05■□□□□ 0.64
ABCD3P28288 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
ABCD3P28288 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ABCD3P28288 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
ABCD3P28288 AC007322.3-201ENST00000426526 701 ntBASIC19.05■□□□□ 0.64
ABCD3P28288 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.05■□□□□ 0.64
ABCD3P28288 AC016405.3-201ENST00000607710 860 ntBASIC19.05■□□□□ 0.64
ABCD3P28288 AL050303.2-201ENST00000619798 666 ntBASIC19.05■□□□□ 0.64
ABCD3P28288 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.05■□□□□ 0.64
ABCD3P28288 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ABCD3P28288 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ABCD3P28288 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.05■□□□□ 0.64
ABCD3P28288 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ABCD3P28288 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ABCD3P28288 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ABCD3P28288 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ABCD3P28288 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.04■□□□□ 0.64
ABCD3P28288 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.04■□□□□ 0.64
ABCD3P28288 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ABCD3P28288 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ABCD3P28288 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ABCD3P28288 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.04■□□□□ 0.64
ABCD3P28288 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ABCD3P28288 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.04■□□□□ 0.64
ABCD3P28288 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.04■□□□□ 0.64
ABCD3P28288 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.04■□□□□ 0.64
ABCD3P28288 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
ABCD3P28288 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
ABCD3P28288 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
ABCD3P28288 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ABCD3P28288 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ABCD3P28288 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ABCD3P28288 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.03■□□□□ 0.64
ABCD3P28288 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.03■□□□□ 0.64
ABCD3P28288 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
ABCD3P28288 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.03■□□□□ 0.64
ABCD3P28288 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.03■□□□□ 0.64
ABCD3P28288 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ABCD3P28288 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.03■□□□□ 0.64
ABCD3P28288 AC069236.1-201ENST00000604339 616 ntBASIC19.03■□□□□ 0.64
ABCD3P28288 FAM21FP-204ENST00000608637 956 ntBASIC19.03■□□□□ 0.64
ABCD3P28288 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
ABCD3P28288 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
ABCD3P28288 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ABCD3P28288 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ABCD3P28288 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ABCD3P28288 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ABCD3P28288 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.03■□□□□ 0.64
ABCD3P28288 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ABCD3P28288 AL137060.1-201ENST00000618151 2648 ntBASIC19.03■□□□□ 0.64
ABCD3P28288 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
ABCD3P28288 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ABCD3P28288 AC011484.1-201ENST00000377652 1995 ntBASIC19.02■□□□□ 0.64
ABCD3P28288 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
ABCD3P28288 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ABCD3P28288 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
ABCD3P28288 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.02■□□□□ 0.64
ABCD3P28288 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ABCD3P28288 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ABCD3P28288 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
ABCD3P28288 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.02■□□□□ 0.64
ABCD3P28288 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.02■□□□□ 0.64
ABCD3P28288 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
ABCD3P28288 RARRES2P4-201ENST00000514074 484 ntBASIC19.02■□□□□ 0.64
ABCD3P28288 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
ABCD3P28288 AC008694.1-202ENST00000636953 945 ntBASIC19.02■□□□□ 0.64
ABCD3P28288 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.02■□□□□ 0.64
ABCD3P28288 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms