Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
VARSP26640 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
VARSP26640 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
VARSP26640 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.26■□□□□ 0.83
VARSP26640 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
VARSP26640 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
VARSP26640 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VARSP26640 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VARSP26640 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VARSP26640 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
VARSP26640 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
VARSP26640 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.25■□□□□ 0.83
VARSP26640 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
VARSP26640 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.25■□□□□ 0.83
VARSP26640 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
VARSP26640 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.25■□□□□ 0.83
VARSP26640 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.25■□□□□ 0.83
VARSP26640 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.25■□□□□ 0.83
VARSP26640 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VARSP26640 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.25■□□□□ 0.83
VARSP26640 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.25■□□□□ 0.83
VARSP26640 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
VARSP26640 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
VARSP26640 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
VARSP26640 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
VARSP26640 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VARSP26640 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
VARSP26640 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.24■□□□□ 0.83
VARSP26640 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
VARSP26640 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VARSP26640 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.24■□□□□ 0.83
VARSP26640 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.24■□□□□ 0.83
VARSP26640 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VARSP26640 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VARSP26640 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.24■□□□□ 0.83
VARSP26640 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
VARSP26640 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
VARSP26640 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
VARSP26640 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VARSP26640 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VARSP26640 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VARSP26640 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
VARSP26640 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
VARSP26640 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
VARSP26640 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VARSP26640 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
VARSP26640 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VARSP26640 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.23■□□□□ 0.83
VARSP26640 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
VARSP26640 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
VARSP26640 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
VARSP26640 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
VARSP26640 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.23■□□□□ 0.83
VARSP26640 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.23■□□□□ 0.83
VARSP26640 AC061975.6-201ENST00000579045 1553 ntBASIC20.23■□□□□ 0.83
VARSP26640 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VARSP26640 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.23■□□□□ 0.83
VARSP26640 AL049796.1-201ENST00000565336 1766 ntBASIC20.23■□□□□ 0.83
VARSP26640 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VARSP26640 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VARSP26640 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
VARSP26640 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.22■□□□□ 0.83
VARSP26640 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
VARSP26640 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
VARSP26640 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.22■□□□□ 0.83
VARSP26640 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
VARSP26640 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
VARSP26640 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.22■□□□□ 0.83
VARSP26640 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VARSP26640 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VARSP26640 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.22■□□□□ 0.83
VARSP26640 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
VARSP26640 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.22■□□□□ 0.83
VARSP26640 AC016769.1-201ENST00000409132 1010 ntBASIC20.22■□□□□ 0.83
VARSP26640 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
VARSP26640 AC104187.1-201ENST00000607510 612 ntBASIC20.22■□□□□ 0.83
VARSP26640 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VARSP26640 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VARSP26640 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VARSP26640 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
VARSP26640 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VARSP26640 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
VARSP26640 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
VARSP26640 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
VARSP26640 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
VARSP26640 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VARSP26640 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
VARSP26640 AC004854.2-201ENST00000608450 1441 ntBASIC20.21■□□□□ 0.83
VARSP26640 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VARSP26640 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.21■□□□□ 0.83
VARSP26640 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
VARSP26640 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
VARSP26640 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.21■□□□□ 0.83
VARSP26640 HLA-L-209ENST00000420110 1011 ntBASIC20.21■□□□□ 0.83
VARSP26640 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.21■□□□□ 0.83
VARSP26640 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.21■□□□□ 0.83
VARSP26640 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.21■□□□□ 0.83
VARSP26640 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
VARSP26640 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
VARSP26640 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms