Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
PTPN3P26045 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.1■□□□□ 0.97
PTPN3P26045 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PTPN3P26045 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PTPN3P26045 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PTPN3P26045 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.09■□□□□ 0.97
PTPN3P26045 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTPN3P26045 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTPN3P26045 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PTPN3P26045 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PTPN3P26045 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.09■□□□□ 0.97
PTPN3P26045 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
PTPN3P26045 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTPN3P26045 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
PTPN3P26045 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.09■□□□□ 0.97
PTPN3P26045 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.09■□□□□ 0.97
PTPN3P26045 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.09■□□□□ 0.97
PTPN3P26045 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.09■□□□□ 0.97
PTPN3P26045 RBM17P2-201ENST00000616397 1405 ntBASIC21.09■□□□□ 0.97
PTPN3P26045 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.09■□□□□ 0.97
PTPN3P26045 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTPN3P26045 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
PTPN3P26045 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTPN3P26045 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
PTPN3P26045 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PTPN3P26045 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PTPN3P26045 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
PTPN3P26045 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.08■□□□□ 0.97
PTPN3P26045 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.08■□□□□ 0.97
PTPN3P26045 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.08■□□□□ 0.97
PTPN3P26045 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PTPN3P26045 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PTPN3P26045 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
PTPN3P26045 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PTPN3P26045 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PTPN3P26045 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PTPN3P26045 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.08■□□□□ 0.97
PTPN3P26045 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PTPN3P26045 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.08■□□□□ 0.97
PTPN3P26045 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.08■□□□□ 0.97
PTPN3P26045 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.08■□□□□ 0.97
PTPN3P26045 AC243732.1-201ENST00000612648 864 ntBASIC21.08■□□□□ 0.97
PTPN3P26045 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.08■□□□□ 0.97
PTPN3P26045 MYCNOS-205ENST00000641950 531 ntBASIC21.08■□□□□ 0.97
PTPN3P26045 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PTPN3P26045 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.08■□□□□ 0.96
PTPN3P26045 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
PTPN3P26045 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTPN3P26045 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTPN3P26045 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTPN3P26045 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.07■□□□□ 0.96
PTPN3P26045 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.07■□□□□ 0.96
PTPN3P26045 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PTPN3P26045 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PTPN3P26045 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.07■□□□□ 0.96
PTPN3P26045 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PTPN3P26045 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTPN3P26045 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTPN3P26045 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
PTPN3P26045 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTPN3P26045 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTPN3P26045 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTPN3P26045 FEM1AP1-201ENST00000431297 1995 ntBASIC21.06■□□□□ 0.96
PTPN3P26045 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PTPN3P26045 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.06■□□□□ 0.96
PTPN3P26045 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
PTPN3P26045 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.06■□□□□ 0.96
PTPN3P26045 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PTPN3P26045 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PTPN3P26045 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.06■□□□□ 0.96
PTPN3P26045 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
PTPN3P26045 AC091799.1-201ENST00000422823 811 ntBASIC21.06■□□□□ 0.96
PTPN3P26045 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.06■□□□□ 0.96
PTPN3P26045 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTPN3P26045 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.06■□□□□ 0.96
PTPN3P26045 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.06■□□□□ 0.96
PTPN3P26045 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.06■□□□□ 0.96
PTPN3P26045 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.06■□□□□ 0.96
PTPN3P26045 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.06■□□□□ 0.96
PTPN3P26045 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PTPN3P26045 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTPN3P26045 AC007225.1-201ENST00000566331 1836 ntBASIC21.06■□□□□ 0.96
PTPN3P26045 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.05■□□□□ 0.96
PTPN3P26045 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTPN3P26045 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PTPN3P26045 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTPN3P26045 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PTPN3P26045 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PTPN3P26045 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.05■□□□□ 0.96
PTPN3P26045 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PTPN3P26045 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.05■□□□□ 0.96
PTPN3P26045 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.05■□□□□ 0.96
PTPN3P26045 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.05■□□□□ 0.96
PTPN3P26045 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
PTPN3P26045 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PTPN3P26045 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTPN3P26045 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTPN3P26045 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTPN3P26045 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTPN3P26045 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms