Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.37■□□□□ 0.37
LMO1P25800 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
LMO1P25800 AC011484.1-201ENST00000377652 1995 ntBASIC17.37■□□□□ 0.37
LMO1P25800 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LMO1P25800 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LMO1P25800 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LMO1P25800 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LMO1P25800 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
LMO1P25800 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
LMO1P25800 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LMO1P25800 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.36■□□□□ 0.37
LMO1P25800 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.36■□□□□ 0.37
LMO1P25800 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LMO1P25800 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LMO1P25800 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
LMO1P25800 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.36■□□□□ 0.37
LMO1P25800 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LMO1P25800 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
LMO1P25800 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
LMO1P25800 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LMO1P25800 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LMO1P25800 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LMO1P25800 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LMO1P25800 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LMO1P25800 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LMO1P25800 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.36■□□□□ 0.37
LMO1P25800 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.36■□□□□ 0.37
LMO1P25800 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.36■□□□□ 0.37
LMO1P25800 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LMO1P25800 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
LMO1P25800 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
LMO1P25800 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.36■□□□□ 0.37
LMO1P25800 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LMO1P25800 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LMO1P25800 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
LMO1P25800 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LMO1P25800 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.35■□□□□ 0.37
LMO1P25800 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LMO1P25800 AL391422.3-201ENST00000603791 2761 ntBASIC17.35■□□□□ 0.37
LMO1P25800 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LMO1P25800 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.35■□□□□ 0.37
LMO1P25800 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.35■□□□□ 0.37
LMO1P25800 SLC7A5P1-201ENST00000568957 537 ntBASIC17.35■□□□□ 0.37
LMO1P25800 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.35■□□□□ 0.37
LMO1P25800 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LMO1P25800 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
LMO1P25800 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LMO1P25800 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.35■□□□□ 0.37
LMO1P25800 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.35■□□□□ 0.37
LMO1P25800 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LMO1P25800 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LMO1P25800 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
LMO1P25800 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.34■□□□□ 0.37
LMO1P25800 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
LMO1P25800 PKD1P6-201ENST00000343738 4769 ntBASIC17.34■□□□□ 0.37
LMO1P25800 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.34■□□□□ 0.37
LMO1P25800 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LMO1P25800 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
LMO1P25800 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
LMO1P25800 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LMO1P25800 AC245052.3-201ENST00000450182 901 ntBASIC17.34■□□□□ 0.37
LMO1P25800 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LMO1P25800 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
LMO1P25800 AC092666.2-201ENST00000613287 246 ntBASIC17.34■□□□□ 0.37
LMO1P25800 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
LMO1P25800 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
LMO1P25800 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LMO1P25800 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.37
LMO1P25800 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LMO1P25800 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
LMO1P25800 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LMO1P25800 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
LMO1P25800 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LMO1P25800 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LMO1P25800 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.33■□□□□ 0.36
LMO1P25800 AC004854.2-201ENST00000608450 1441 ntBASIC17.33■□□□□ 0.36
LMO1P25800 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LMO1P25800 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LMO1P25800 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LMO1P25800 SLC7A5P2-201ENST00000553010 536 ntBASIC17.33■□□□□ 0.36
LMO1P25800 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LMO1P25800 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LMO1P25800 LINC01006-201ENST00000333319 2292 ntBASIC17.33■□□□□ 0.36
LMO1P25800 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
LMO1P25800 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.33■□□□□ 0.36
LMO1P25800 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LMO1P25800 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LMO1P25800 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.33■□□□□ 0.36
LMO1P25800 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LMO1P25800 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
LMO1P25800 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LMO1P25800 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
LMO1P25800 KRT19P1-201ENST00000405746 1186 ntBASIC17.32■□□□□ 0.36
LMO1P25800 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
LMO1P25800 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.32■□□□□ 0.36
LMO1P25800 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.32■□□□□ 0.36
LMO1P25800 RARRES2P6-201ENST00000567333 442 ntBASIC17.32■□□□□ 0.36
LMO1P25800 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LMO1P25800 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.32■□□□□ 0.36
LMO1P25800 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms