Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.36■□□□□ 0.37
CXCL3P19876 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.36■□□□□ 0.37
CXCL3P19876 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC17.36■□□□□ 0.37
CXCL3P19876 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC17.36■□□□□ 0.37
CXCL3P19876 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CXCL3P19876 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CXCL3P19876 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CXCL3P19876 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
CXCL3P19876 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CXCL3P19876 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CXCL3P19876 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CXCL3P19876 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.36■□□□□ 0.37
CXCL3P19876 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CXCL3P19876 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.36■□□□□ 0.37
CXCL3P19876 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.36■□□□□ 0.37
CXCL3P19876 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
CXCL3P19876 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
CXCL3P19876 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CXCL3P19876 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.36■□□□□ 0.37
CXCL3P19876 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CXCL3P19876 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CXCL3P19876 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CXCL3P19876 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CXCL3P19876 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CXCL3P19876 FP700111.2-201ENST00000619190 1892 ntBASIC17.35■□□□□ 0.37
CXCL3P19876 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CXCL3P19876 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CXCL3P19876 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CXCL3P19876 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CXCL3P19876 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CXCL3P19876 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CXCL3P19876 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CXCL3P19876 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.35■□□□□ 0.37
CXCL3P19876 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CXCL3P19876 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CXCL3P19876 KRT18P60-201ENST00000312876 1297 ntBASIC17.35■□□□□ 0.37
CXCL3P19876 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CXCL3P19876 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC17.35■□□□□ 0.37
CXCL3P19876 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC17.35■□□□□ 0.37
CXCL3P19876 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC17.35■□□□□ 0.37
CXCL3P19876 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CXCL3P19876 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CXCL3P19876 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC17.35■□□□□ 0.37
CXCL3P19876 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CXCL3P19876 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CXCL3P19876 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.35■□□□□ 0.37
CXCL3P19876 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.35■□□□□ 0.37
CXCL3P19876 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CXCL3P19876 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CXCL3P19876 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
CXCL3P19876 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.35■□□□□ 0.37
CXCL3P19876 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CXCL3P19876 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CXCL3P19876 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.34■□□□□ 0.37
CXCL3P19876 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CXCL3P19876 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
CXCL3P19876 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CXCL3P19876 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CXCL3P19876 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CXCL3P19876 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CXCL3P19876 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CXCL3P19876 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CXCL3P19876 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.34■□□□□ 0.37
CXCL3P19876 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
CXCL3P19876 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.34■□□□□ 0.37
CXCL3P19876 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.34■□□□□ 0.37
CXCL3P19876 THA1P-201ENST00000590384 1145 ntBASIC17.34■□□□□ 0.37
CXCL3P19876 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CXCL3P19876 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CXCL3P19876 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CXCL3P19876 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CXCL3P19876 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CXCL3P19876 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CXCL3P19876 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.33■□□□□ 0.37
CXCL3P19876 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CXCL3P19876 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
CXCL3P19876 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CXCL3P19876 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC17.33■□□□□ 0.36
CXCL3P19876 HYI-210ENST00000486909 905 ntTSL 5 BASIC17.33■□□□□ 0.36
CXCL3P19876 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CXCL3P19876 SNX5-217ENST00000606557 1087 ntBASIC17.33■□□□□ 0.36
CXCL3P19876 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CXCL3P19876 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.33■□□□□ 0.36
CXCL3P19876 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CXCL3P19876 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CXCL3P19876 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CXCL3P19876 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CXCL3P19876 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CXCL3P19876 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CXCL3P19876 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CXCL3P19876 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CXCL3P19876 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CXCL3P19876 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CXCL3P19876 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CXCL3P19876 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CXCL3P19876 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CXCL3P19876 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CXCL3P19876 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CXCL3P19876 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CXCL3P19876 AP004607.7-201ENST00000527152 1677 ntBASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms