Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NFKB1P19838 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NFKB1P19838 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NFKB1P19838 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NFKB1P19838 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NFKB1P19838 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NFKB1P19838 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
NFKB1P19838 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
NFKB1P19838 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NFKB1P19838 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.03■□□□□ 0.96
NFKB1P19838 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NFKB1P19838 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NFKB1P19838 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NFKB1P19838 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.03■□□□□ 0.96
NFKB1P19838 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NFKB1P19838 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NFKB1P19838 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
NFKB1P19838 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
NFKB1P19838 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NFKB1P19838 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NFKB1P19838 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.02■□□□□ 0.96
NFKB1P19838 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.02■□□□□ 0.96
NFKB1P19838 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NFKB1P19838 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NFKB1P19838 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NFKB1P19838 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.02■□□□□ 0.96
NFKB1P19838 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.02■□□□□ 0.96
NFKB1P19838 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.02■□□□□ 0.96
NFKB1P19838 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.02■□□□□ 0.96
NFKB1P19838 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NFKB1P19838 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.02■□□□□ 0.96
NFKB1P19838 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.02■□□□□ 0.96
NFKB1P19838 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.02■□□□□ 0.96
NFKB1P19838 MYCNOS-205ENST00000641950 531 ntBASIC21.02■□□□□ 0.96
NFKB1P19838 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NFKB1P19838 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
NFKB1P19838 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NFKB1P19838 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
NFKB1P19838 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NFKB1P19838 RBM17P2-201ENST00000616397 1405 ntBASIC21.02■□□□□ 0.96
NFKB1P19838 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NFKB1P19838 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.95
NFKB1P19838 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.01■□□□□ 0.95
NFKB1P19838 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.01■□□□□ 0.95
NFKB1P19838 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
NFKB1P19838 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
NFKB1P19838 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.01■□□□□ 0.95
NFKB1P19838 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NFKB1P19838 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.01■□□□□ 0.95
NFKB1P19838 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.01■□□□□ 0.95
NFKB1P19838 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.01■□□□□ 0.95
NFKB1P19838 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NFKB1P19838 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NFKB1P19838 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.01■□□□□ 0.95
NFKB1P19838 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NFKB1P19838 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NFKB1P19838 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
NFKB1P19838 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NFKB1P19838 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
NFKB1P19838 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
NFKB1P19838 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NFKB1P19838 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
NFKB1P19838 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
NFKB1P19838 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
NFKB1P19838 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21■□□□□ 0.95
NFKB1P19838 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21■□□□□ 0.95
NFKB1P19838 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21■□□□□ 0.95
NFKB1P19838 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21■□□□□ 0.95
NFKB1P19838 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NFKB1P19838 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21■□□□□ 0.95
NFKB1P19838 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21■□□□□ 0.95
NFKB1P19838 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21■□□□□ 0.95
NFKB1P19838 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
NFKB1P19838 ANKRD20A6P-201ENST00000618763 204 ntBASIC21■□□□□ 0.95
NFKB1P19838 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21■□□□□ 0.95
NFKB1P19838 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
NFKB1P19838 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21■□□□□ 0.95
NFKB1P19838 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21■□□□□ 0.95
NFKB1P19838 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NFKB1P19838 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21■□□□□ 0.95
NFKB1P19838 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21■□□□□ 0.95
NFKB1P19838 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
NFKB1P19838 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NFKB1P19838 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NFKB1P19838 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
NFKB1P19838 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
NFKB1P19838 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NFKB1P19838 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.99■□□□□ 0.95
NFKB1P19838 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.99■□□□□ 0.95
NFKB1P19838 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NFKB1P19838 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.99■□□□□ 0.95
NFKB1P19838 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.99■□□□□ 0.95
NFKB1P19838 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.99■□□□□ 0.95
NFKB1P19838 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NFKB1P19838 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NFKB1P19838 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.99■□□□□ 0.95
NFKB1P19838 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.99■□□□□ 0.95
NFKB1P19838 AC243732.1-201ENST00000612648 864 ntBASIC20.99■□□□□ 0.95
NFKB1P19838 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
NFKB1P19838 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms