Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.74■□□□□ 0.91
VCLP18206 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.74■□□□□ 0.91
VCLP18206 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VCLP18206 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
VCLP18206 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VCLP18206 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VCLP18206 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
VCLP18206 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.73■□□□□ 0.91
VCLP18206 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VCLP18206 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
VCLP18206 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
VCLP18206 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VCLP18206 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.73■□□□□ 0.91
VCLP18206 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.73■□□□□ 0.91
VCLP18206 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.73■□□□□ 0.91
VCLP18206 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VCLP18206 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
VCLP18206 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
VCLP18206 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
VCLP18206 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VCLP18206 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.72■□□□□ 0.91
VCLP18206 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VCLP18206 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.72■□□□□ 0.91
VCLP18206 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VCLP18206 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.72■□□□□ 0.91
VCLP18206 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.72■□□□□ 0.91
VCLP18206 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
VCLP18206 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
VCLP18206 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VCLP18206 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VCLP18206 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
VCLP18206 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VCLP18206 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VCLP18206 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VCLP18206 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VCLP18206 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VCLP18206 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VCLP18206 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VCLP18206 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.71■□□□□ 0.91
VCLP18206 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
VCLP18206 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VCLP18206 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VCLP18206 UBE2DNL-204ENST00000602536 740 ntBASIC20.71■□□□□ 0.91
VCLP18206 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.71■□□□□ 0.91
VCLP18206 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VCLP18206 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VCLP18206 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
VCLP18206 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
VCLP18206 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VCLP18206 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
VCLP18206 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VCLP18206 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
VCLP18206 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
VCLP18206 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VCLP18206 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
VCLP18206 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
VCLP18206 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
VCLP18206 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VCLP18206 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VCLP18206 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
VCLP18206 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.7■□□□□ 0.9
VCLP18206 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.7■□□□□ 0.9
VCLP18206 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.7■□□□□ 0.9
VCLP18206 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.7■□□□□ 0.9
VCLP18206 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VCLP18206 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
VCLP18206 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VCLP18206 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VCLP18206 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VCLP18206 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.7■□□□□ 0.9
VCLP18206 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VCLP18206 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.69■□□□□ 0.9
VCLP18206 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VCLP18206 AC007952.6-201ENST00000573168 2673 ntBASIC20.69■□□□□ 0.9
VCLP18206 AC003957.1-201ENST00000625108 2673 ntBASIC20.69■□□□□ 0.9
VCLP18206 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VCLP18206 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.69■□□□□ 0.9
VCLP18206 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.69■□□□□ 0.9
VCLP18206 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.69■□□□□ 0.9
VCLP18206 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
VCLP18206 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VCLP18206 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.69■□□□□ 0.9
VCLP18206 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.69■□□□□ 0.9
VCLP18206 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.69■□□□□ 0.9
VCLP18206 MYCNOS-205ENST00000641950 531 ntBASIC20.69■□□□□ 0.9
VCLP18206 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VCLP18206 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VCLP18206 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
VCLP18206 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.69■□□□□ 0.9
VCLP18206 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VCLP18206 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.68■□□□□ 0.9
VCLP18206 FEM1AP4-201ENST00000443167 1987 ntBASIC20.68■□□□□ 0.9
VCLP18206 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.68■□□□□ 0.9
VCLP18206 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
VCLP18206 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VCLP18206 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
VCLP18206 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.68■□□□□ 0.9
VCLP18206 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VCLP18206 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.68■□□□□ 0.9
VCLP18206 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms