Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.63■□□□□ 0.73
CCL4P13236 SOX15-203ENST00000570788 1093 ntBASIC19.63■□□□□ 0.73
CCL4P13236 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.63■□□□□ 0.73
CCL4P13236 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CCL4P13236 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.62■□□□□ 0.73
CCL4P13236 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.62■□□□□ 0.73
CCL4P13236 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCL4P13236 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CCL4P13236 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.62■□□□□ 0.73
CCL4P13236 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.62■□□□□ 0.73
CCL4P13236 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCL4P13236 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCL4P13236 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCL4P13236 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCL4P13236 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CCL4P13236 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCL4P13236 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
CCL4P13236 KRT17P3-201ENST00000420566 1262 ntBASIC19.62■□□□□ 0.73
CCL4P13236 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.62■□□□□ 0.73
CCL4P13236 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.62■□□□□ 0.73
CCL4P13236 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.62■□□□□ 0.73
CCL4P13236 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CCL4P13236 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCL4P13236 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.62■□□□□ 0.73
CCL4P13236 AC105020.6-201ENST00000621523 1217 ntBASIC19.62■□□□□ 0.73
CCL4P13236 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCL4P13236 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.62■□□□□ 0.73
CCL4P13236 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCL4P13236 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCL4P13236 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CCL4P13236 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.62■□□□□ 0.73
CCL4P13236 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCL4P13236 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCL4P13236 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCL4P13236 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
CCL4P13236 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCL4P13236 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCL4P13236 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.61■□□□□ 0.73
CCL4P13236 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CCL4P13236 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.61■□□□□ 0.73
CCL4P13236 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCL4P13236 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCL4P13236 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.61■□□□□ 0.73
CCL4P13236 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCL4P13236 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.61■□□□□ 0.73
CCL4P13236 FAM197Y4-202ENST00000622692 608 ntBASIC19.61■□□□□ 0.73
CCL4P13236 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCL4P13236 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCL4P13236 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.61■□□□□ 0.73
CCL4P13236 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.61■□□□□ 0.73
CCL4P13236 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCL4P13236 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCL4P13236 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCL4P13236 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CCL4P13236 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CCL4P13236 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCL4P13236 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCL4P13236 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.6■□□□□ 0.73
CCL4P13236 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCL4P13236 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.6■□□□□ 0.73
CCL4P13236 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.6■□□□□ 0.73
CCL4P13236 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.6■□□□□ 0.73
CCL4P13236 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.6■□□□□ 0.73
CCL4P13236 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.6■□□□□ 0.73
CCL4P13236 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CCL4P13236 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCL4P13236 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCL4P13236 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCL4P13236 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.59■□□□□ 0.73
CCL4P13236 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCL4P13236 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.59■□□□□ 0.73
CCL4P13236 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CCL4P13236 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.59■□□□□ 0.73
CCL4P13236 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCL4P13236 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCL4P13236 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.59■□□□□ 0.73
CCL4P13236 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.59■□□□□ 0.73
CCL4P13236 RN7SL471P-201ENST00000580476 299 ntBASIC19.59■□□□□ 0.73
CCL4P13236 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.59■□□□□ 0.73
CCL4P13236 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCL4P13236 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.59■□□□□ 0.73
CCL4P13236 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCL4P13236 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CCL4P13236 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCL4P13236 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CCL4P13236 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
CCL4P13236 AC242852.2-201ENST00000615738 1807 ntBASIC19.58■□□□□ 0.73
CCL4P13236 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
CCL4P13236 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCL4P13236 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCL4P13236 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCL4P13236 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCL4P13236 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.58■□□□□ 0.72
CCL4P13236 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCL4P13236 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCL4P13236 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.58■□□□□ 0.72
CCL4P13236 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCL4P13236 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCL4P13236 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCL4P13236 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms