Protein–RNA interactions for Protein: P09455

RBP1, Retinol-binding protein 1, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBP1P09455 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.36■□□□□ 0.85
RBP1P09455 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RBP1P09455 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.36■□□□□ 0.85
RBP1P09455 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RBP1P09455 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RBP1P09455 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.36■□□□□ 0.85
RBP1P09455 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.36■□□□□ 0.85
RBP1P09455 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.36■□□□□ 0.85
RBP1P09455 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
RBP1P09455 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RBP1P09455 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
RBP1P09455 FP700111.2-201ENST00000619190 1892 ntBASIC20.36■□□□□ 0.85
RBP1P09455 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RBP1P09455 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RBP1P09455 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RBP1P09455 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.35■□□□□ 0.85
RBP1P09455 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RBP1P09455 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
RBP1P09455 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.35■□□□□ 0.85
RBP1P09455 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RBP1P09455 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RBP1P09455 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RBP1P09455 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.35■□□□□ 0.85
RBP1P09455 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.35■□□□□ 0.85
RBP1P09455 AC079140.4-201ENST00000507448 529 ntBASIC20.35■□□□□ 0.85
RBP1P09455 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.35■□□□□ 0.85
RBP1P09455 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RBP1P09455 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.35■□□□□ 0.85
RBP1P09455 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.35■□□□□ 0.85
RBP1P09455 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.35■□□□□ 0.85
RBP1P09455 KRT87P-202ENST00000534226 1464 ntBASIC20.35■□□□□ 0.85
RBP1P09455 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
RBP1P09455 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RBP1P09455 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RBP1P09455 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RBP1P09455 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RBP1P09455 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RBP1P09455 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RBP1P09455 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RBP1P09455 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RBP1P09455 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RBP1P09455 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RBP1P09455 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RBP1P09455 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.34■□□□□ 0.85
RBP1P09455 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
RBP1P09455 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RBP1P09455 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RBP1P09455 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RBP1P09455 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RBP1P09455 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
RBP1P09455 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RBP1P09455 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RBP1P09455 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
RBP1P09455 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
RBP1P09455 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.33■□□□□ 0.85
RBP1P09455 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RBP1P09455 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.33■□□□□ 0.85
RBP1P09455 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RBP1P09455 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RBP1P09455 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.33■□□□□ 0.85
RBP1P09455 AC142381.2-201ENST00000566120 298 ntBASIC20.33■□□□□ 0.85
RBP1P09455 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.84
RBP1P09455 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.33■□□□□ 0.84
RBP1P09455 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
RBP1P09455 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
RBP1P09455 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
RBP1P09455 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RBP1P09455 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RBP1P09455 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RBP1P09455 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
RBP1P09455 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
RBP1P09455 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
RBP1P09455 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RBP1P09455 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RBP1P09455 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.32■□□□□ 0.84
RBP1P09455 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RBP1P09455 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.32■□□□□ 0.84
RBP1P09455 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RBP1P09455 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RBP1P09455 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.32■□□□□ 0.84
RBP1P09455 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
RBP1P09455 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
RBP1P09455 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RBP1P09455 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RBP1P09455 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RBP1P09455 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.32■□□□□ 0.84
RBP1P09455 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.32■□□□□ 0.84
RBP1P09455 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RBP1P09455 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
RBP1P09455 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RBP1P09455 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RBP1P09455 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
RBP1P09455 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RBP1P09455 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.31■□□□□ 0.84
RBP1P09455 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
RBP1P09455 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RBP1P09455 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
RBP1P09455 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.31■□□□□ 0.84
RBP1P09455 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RBP1P09455 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms