Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC097493.4-201ENST00000641197 219 ntBASIC27.57■■■□□ 2
COL5A2P05997 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC27.57■■■□□ 2
COL5A2P05997 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC27.57■■■□□ 2
COL5A2P05997 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC27.57■■■□□ 2
COL5A2P05997 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC27.57■■■□□ 2
COL5A2P05997 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC27.57■■■□□ 2
COL5A2P05997 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC27.57■■■□□ 2
COL5A2P05997 C2orf69P4-201ENST00000565394 541 ntBASIC27.57■■■□□ 2
COL5A2P05997 SNX21-213ENST00000614929 587 ntTSL 5 BASIC27.57■■■□□ 2
COL5A2P05997 AC133561.5-201ENST00000635547 218 ntBASIC27.57■■■□□ 2
COL5A2P05997 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC27.57■■■□□ 2
COL5A2P05997 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC27.57■■■□□ 2
COL5A2P05997 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC27.56■■■□□ 2
COL5A2P05997 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC27.56■■■□□ 2
COL5A2P05997 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
COL5A2P05997 GGT1-206ENST00000404223 952 ntTSL 2 BASIC27.56■■■□□ 2
COL5A2P05997 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC27.56■■■□□ 2
COL5A2P05997 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC27.56■■■□□ 2
COL5A2P05997 PPOX-219ENST00000544598 813 ntTSL 2 BASIC27.56■■■□□ 2
COL5A2P05997 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
COL5A2P05997 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
COL5A2P05997 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
COL5A2P05997 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC27.56■■■□□ 2
COL5A2P05997 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
COL5A2P05997 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC27.56■■■□□ 2
COL5A2P05997 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC27.56■■■□□ 2
COL5A2P05997 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC27.56■■■□□ 2
COL5A2P05997 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
COL5A2P05997 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC27.56■■■□□ 2
COL5A2P05997 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC27.55■■■□□ 2
COL5A2P05997 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC27.55■■■□□ 2
COL5A2P05997 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC27.55■■■□□ 2
COL5A2P05997 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC27.55■■■□□ 2
COL5A2P05997 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC27.55■■■□□ 2
COL5A2P05997 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC27.55■■■□□ 2
COL5A2P05997 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC27.55■■■□□ 2
COL5A2P05997 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC27.55■■■□□ 2
COL5A2P05997 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC27.55■■■□□ 2
COL5A2P05997 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
COL5A2P05997 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC27.54■■■□□ 2
COL5A2P05997 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
COL5A2P05997 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC27.54■■■□□ 2
COL5A2P05997 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
COL5A2P05997 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC27.54■■■□□ 2
COL5A2P05997 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC27.54■■■□□ 2
COL5A2P05997 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC27.54■■■□□ 2
COL5A2P05997 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
COL5A2P05997 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC27.54■■■□□ 2
COL5A2P05997 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC27.54■■■□□ 2
COL5A2P05997 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
COL5A2P05997 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC27.53■■■□□ 2
COL5A2P05997 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
COL5A2P05997 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC27.53■■■□□ 2
COL5A2P05997 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
COL5A2P05997 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC27.53■■■□□ 2
COL5A2P05997 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC27.53■■■□□ 2
COL5A2P05997 KRASP1-201ENST00000407852 552 ntBASIC27.53■■■□□ 2
COL5A2P05997 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC27.53■■■□□ 2
COL5A2P05997 SERP1-205ENST00000487153 657 ntTSL 4 BASIC27.53■■■□□ 2
COL5A2P05997 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC27.53■■■□□ 2
COL5A2P05997 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
COL5A2P05997 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC27.53■■■□□ 2
COL5A2P05997 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
COL5A2P05997 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC27.52■■■□□ 2
COL5A2P05997 THEM4-205ENST00000489410 643 ntTSL 2 BASIC27.52■■■□□ 2
COL5A2P05997 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
COL5A2P05997 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC27.52■■■□□ 2
COL5A2P05997 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC27.52■■■□□ 2
COL5A2P05997 AL135905.2-201ENST00000584934 1404 ntBASIC27.52■■■□□ 2
COL5A2P05997 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC27.52■■■□□ 2
COL5A2P05997 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC27.52■■■□□ 2
COL5A2P05997 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC27.52■■■□□ 2
COL5A2P05997 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
COL5A2P05997 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC27.51■■■□□ 2
COL5A2P05997 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC27.51■■■□□ 2
COL5A2P05997 AC110285.5-201ENST00000611501 352 ntBASIC27.51■■■□□ 2
COL5A2P05997 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
COL5A2P05997 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC27.51■■□□□ 1.99
COL5A2P05997 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
COL5A2P05997 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
COL5A2P05997 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
COL5A2P05997 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
COL5A2P05997 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
COL5A2P05997 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC27.51■■□□□ 1.99
COL5A2P05997 AC005829.2-201ENST00000571422 1056 ntBASIC27.51■■□□□ 1.99
COL5A2P05997 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC27.51■■□□□ 1.99
COL5A2P05997 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
COL5A2P05997 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC27.5■■□□□ 1.99
COL5A2P05997 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC27.5■■□□□ 1.99
COL5A2P05997 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC27.5■■□□□ 1.99
COL5A2P05997 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC27.5■■□□□ 1.99
COL5A2P05997 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC27.5■■□□□ 1.99
COL5A2P05997 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
COL5A2P05997 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC27.5■■□□□ 1.99
COL5A2P05997 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC27.5■■□□□ 1.99
COL5A2P05997 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC27.5■■□□□ 1.99
COL5A2P05997 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC27.5■■□□□ 1.99
COL5A2P05997 PENK-204ENST00000518770 863 ntTSL 2 BASIC27.5■■□□□ 1.99
COL5A2P05997 TK2-213ENST00000563369 882 ntTSL 5 BASIC27.5■■□□□ 1.99
COL5A2P05997 RARRES2P10-201ENST00000564312 460 ntBASIC27.5■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms