Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CLDN1O95832 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN1O95832 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.47■□□□□ 0.55
CLDN1O95832 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN1O95832 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN1O95832 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN1O95832 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN1O95832 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN1O95832 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.46■□□□□ 0.55
CLDN1O95832 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN1O95832 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.46■□□□□ 0.55
CLDN1O95832 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.46■□□□□ 0.55
CLDN1O95832 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN1O95832 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN1O95832 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.46■□□□□ 0.55
CLDN1O95832 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CLDN1O95832 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CLDN1O95832 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.46■□□□□ 0.55
CLDN1O95832 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
CLDN1O95832 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN1O95832 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN1O95832 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN1O95832 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN1O95832 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CLDN1O95832 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.46■□□□□ 0.54
CLDN1O95832 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN1O95832 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.45■□□□□ 0.54
CLDN1O95832 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CLDN1O95832 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN1O95832 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN1O95832 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.45■□□□□ 0.54
CLDN1O95832 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
CLDN1O95832 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
CLDN1O95832 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CLDN1O95832 AC069544.1-201ENST00000609399 999 ntBASIC18.45■□□□□ 0.54
CLDN1O95832 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN1O95832 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CLDN1O95832 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
CLDN1O95832 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN1O95832 KRT17P2-201ENST00000300992 1314 ntBASIC18.45■□□□□ 0.54
CLDN1O95832 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN1O95832 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN1O95832 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN1O95832 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN1O95832 C1orf229-201ENST00000623686 2258 ntBASIC18.44■□□□□ 0.54
CLDN1O95832 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CLDN1O95832 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN1O95832 AP006587.3-201ENST00000525742 1516 ntBASIC18.44■□□□□ 0.54
CLDN1O95832 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN1O95832 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
CLDN1O95832 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN1O95832 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
CLDN1O95832 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CLDN1O95832 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN1O95832 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN1O95832 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN1O95832 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN1O95832 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN1O95832 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.44■□□□□ 0.54
CLDN1O95832 POU5F1P4-201ENST00000413175 1085 ntBASIC18.44■□□□□ 0.54
CLDN1O95832 AC087499.1-201ENST00000418141 1075 ntBASIC18.44■□□□□ 0.54
CLDN1O95832 AC012618.2-201ENST00000428058 849 ntBASIC18.44■□□□□ 0.54
CLDN1O95832 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.44■□□□□ 0.54
CLDN1O95832 AC233702.5-201ENST00000584107 538 ntBASIC18.44■□□□□ 0.54
CLDN1O95832 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN1O95832 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN1O95832 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN1O95832 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN1O95832 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CLDN1O95832 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
CLDN1O95832 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.44■□□□□ 0.54
CLDN1O95832 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN1O95832 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CLDN1O95832 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN1O95832 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN1O95832 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN1O95832 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN1O95832 RPS2P55-201ENST00000397318 883 ntBASIC18.43■□□□□ 0.54
CLDN1O95832 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.43■□□□□ 0.54
CLDN1O95832 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN1O95832 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN1O95832 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN1O95832 AC107956.1-201ENST00000494359 873 ntBASIC18.43■□□□□ 0.54
CLDN1O95832 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.43■□□□□ 0.54
CLDN1O95832 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.43■□□□□ 0.54
CLDN1O95832 AC243732.1-201ENST00000612648 864 ntBASIC18.43■□□□□ 0.54
CLDN1O95832 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
CLDN1O95832 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.43■□□□□ 0.54
CLDN1O95832 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN1O95832 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CLDN1O95832 AC092368.3-202ENST00000574180 1591 ntBASIC18.42■□□□□ 0.54
CLDN1O95832 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN1O95832 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.42■□□□□ 0.54
CLDN1O95832 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CLDN1O95832 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.42■□□□□ 0.54
CLDN1O95832 TSPY15P-201ENST00000457163 923 ntBASIC18.42■□□□□ 0.54
CLDN1O95832 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN1O95832 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN1O95832 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN1O95832 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms