Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNCGO76070 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNCGO76070 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNCGO76070 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNCGO76070 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC13.94□□□□□ -0.18
SNCGO76070 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNCGO76070 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
SNCGO76070 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNCGO76070 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SNCGO76070 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SNCGO76070 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNCGO76070 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNCGO76070 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SNCGO76070 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNCGO76070 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNCGO76070 DUX4L11-201ENST00000611504 1267 ntBASIC13.94□□□□□ -0.18
SNCGO76070 DUX4L12-201ENST00000614593 1267 ntBASIC13.94□□□□□ -0.18
SNCGO76070 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC13.94□□□□□ -0.18
SNCGO76070 DUX4L14-201ENST00000621227 1267 ntBASIC13.94□□□□□ -0.18
SNCGO76070 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
SNCGO76070 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNCGO76070 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC13.94□□□□□ -0.18
SNCGO76070 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNCGO76070 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
SNCGO76070 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNCGO76070 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNCGO76070 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SNCGO76070 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNCGO76070 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNCGO76070 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNCGO76070 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SNCGO76070 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNCGO76070 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNCGO76070 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SNCGO76070 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNCGO76070 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNCGO76070 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNCGO76070 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SNCGO76070 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SNCGO76070 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SNCGO76070 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SNCGO76070 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNCGO76070 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNCGO76070 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNCGO76070 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC13.93□□□□□ -0.18
SNCGO76070 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SNCGO76070 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SNCGO76070 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNCGO76070 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SNCGO76070 AC020916.1-201ENST00000587762 1774 ntBASIC13.93□□□□□ -0.18
SNCGO76070 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SNCGO76070 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNCGO76070 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNCGO76070 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNCGO76070 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNCGO76070 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNCGO76070 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNCGO76070 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNCGO76070 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SNCGO76070 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC13.92□□□□□ -0.18
SNCGO76070 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SNCGO76070 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC13.92□□□□□ -0.18
SNCGO76070 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNCGO76070 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC13.92□□□□□ -0.18
SNCGO76070 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNCGO76070 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNCGO76070 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNCGO76070 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNCGO76070 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC13.92□□□□□ -0.18
SNCGO76070 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNCGO76070 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
SNCGO76070 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SNCGO76070 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNCGO76070 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNCGO76070 AC106820.2-201ENST00000563775 3264 ntBASIC13.92□□□□□ -0.18
SNCGO76070 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNCGO76070 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
SNCGO76070 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNCGO76070 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNCGO76070 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SNCGO76070 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC13.92□□□□□ -0.18
SNCGO76070 AC010542.4-201ENST00000563151 1910 ntBASIC13.92□□□□□ -0.18
SNCGO76070 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SNCGO76070 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SNCGO76070 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SNCGO76070 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SNCGO76070 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SNCGO76070 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SNCGO76070 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC13.91□□□□□ -0.18
SNCGO76070 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SNCGO76070 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC13.91□□□□□ -0.18
SNCGO76070 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC13.91□□□□□ -0.18
SNCGO76070 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC13.91□□□□□ -0.18
SNCGO76070 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SNCGO76070 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
SNCGO76070 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SNCGO76070 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SNCGO76070 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
SNCGO76070 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
SNCGO76070 AL592295.1-201ENST00000400984 884 ntBASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms